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  5. AT5G02930

AT5G02930


Description : F-box/RNI-like superfamily protein


Gene families : OG0010143 (Archaeplastida) Phylogenetic Tree(s): OG0010143_tree ,
OG_05_0010195 (LandPlants) Phylogenetic Tree(s): OG_05_0010195_tree ,
OG_06_0009128 (SeedPlants) Phylogenetic Tree(s): OG_06_0009128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G02930
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G57690 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G18150 No alias RNI-like superfamily protein 0.08 Archaeplastida
AT3G28410 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP Neighborhood
BP GO:0000706 meiotic DNA double-strand break processing IEP Neighborhood
BP GO:0000729 DNA double-strand break processing IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004108 citrate (Si)-synthase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006266 DNA ligation IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006312 mitotic recombination IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0034086 maintenance of sister chromatid cohesion IEP Neighborhood
BP GO:0034090 maintenance of meiotic sister chromatid cohesion IEP Neighborhood
MF GO:0036440 citrate synthase activity IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 29 65
No external refs found!