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  5. Pp3s52_140V3.1

Pp3s52_140V3.1


Description : No annotation


Gene families : OG0001427 (Archaeplastida) Phylogenetic Tree(s): OG0001427_tree ,
OG_05_0002520 (LandPlants) Phylogenetic Tree(s): OG_05_0002520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3s52_140V3.1
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g08340.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Smo76977 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!