AT5G04760

Description : Duplicated homeodomain-like superfamily protein

Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0005097 (SeedPlants) Phylogenetic Tree(s): OG_06_0005097_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G04760
Cluster	HCCA: Cluster_215

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00108p00066140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AT5G05790	No alias	Duplicated homeodomain-like superfamily protein	0.04	Archaeplastida
GSVIVT01009723001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01016370001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
LOC_Os01g04930.1	No alias	transcription factor (MYB-related)	0.04	Archaeplastida
LOC_Os01g64360.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
LOC_Os04g58020.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
LOC_Os05g37060.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
LOC_Os05g50340.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
MA_11322g0010	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
MA_17466g0010	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
MA_488767g0010	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
MA_7049680g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp4g22430.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Pp3c4_5410V3.1	No alias	myb-like transcription factor family protein	0.04	Archaeplastida
Zm00001e006540_P001	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Zm00001e016939_P001	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Zm00001e025784_P001	No alias	transcription factor (MYB-related)	0.02	Archaeplastida
Zm00001e028003_P001	No alias	transcription factor (MYB-related)	0.02	Archaeplastida
Zm00001e031755_P001	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Zm00001e040264_P001	No alias	transcription factor (MYB-related)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010286	heat acclimation	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0000303	response to superoxide	IEP	Neighborhood
BP	GO:0000305	response to oxygen radical	IEP	Neighborhood
CC	GO:0000781	chromosome, telomeric region	IEP	Neighborhood
CC	GO:0000784	nuclear chromosome, telomeric region	IEP	Neighborhood
BP	GO:0002679	respiratory burst involved in defense response	IEP	Neighborhood
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004708	MAP kinase kinase activity	IEP	Neighborhood
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	Neighborhood
MF	GO:0004713	protein tyrosine kinase activity	IEP	Neighborhood
BP	GO:0006970	response to osmotic stress	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0009403	toxin biosynthetic process	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
BP	GO:0009651	response to salt stress	IEP	Neighborhood
BP	GO:0009688	abscisic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009692	ethylene metabolic process	IEP	Neighborhood
BP	GO:0009693	ethylene biosynthetic process	IEP	Neighborhood
BP	GO:0009700	indole phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009873	ethylene-activated signaling pathway	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010120	camalexin biosynthetic process	IEP	Neighborhood
BP	GO:0010200	response to chitin	IEP	Neighborhood
BP	GO:0010243	response to organonitrogen compound	IEP	Neighborhood
MF	GO:0010436	carotenoid dioxygenase activity	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
BP	GO:0015804	neutral amino acid transport	IEP	Neighborhood
BP	GO:0015824	proline transport	IEP	Neighborhood
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Neighborhood
BP	GO:0016233	telomere capping	IEP	Neighborhood
MF	GO:0016405	CoA-ligase activity	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0019209	kinase activator activity	IEP	Neighborhood
MF	GO:0030295	protein kinase activator activity	IEP	Neighborhood
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0042446	hormone biosynthetic process	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
BP	GO:0042538	hyperosmotic salinity response	IEP	Neighborhood
BP	GO:0043069	negative regulation of programmed cell death	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	Neighborhood
BP	GO:0043449	cellular alkene metabolic process	IEP	Neighborhood
BP	GO:0043450	alkene biosynthetic process	IEP	Neighborhood
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	Neighborhood
BP	GO:0045730	respiratory burst	IEP	Neighborhood
BP	GO:0046217	indole phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0046777	protein autophosphorylation	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0052314	phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0052315	phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0052317	camalexin metabolic process	IEP	Neighborhood
BP	GO:0060548	negative regulation of cell death	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
CC	GO:0098687	chromosomal region	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1900673	olefin metabolic process	IEP	Neighborhood
BP	GO:1900674	olefin biosynthetic process	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	100	144

External Links

No external refs found!

AT5G04760

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation