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MA_10090g0010


Description : methyl-tetrahydrofolate-dependent methionine synthase


Gene families : OG0002593 (Archaeplastida) Phylogenetic Tree(s): OG0002593_tree ,
OG_05_0002149 (LandPlants) Phylogenetic Tree(s): OG_05_0002149_tree ,
OG_06_0002104 (SeedPlants) Phylogenetic Tree(s): OG_06_0002104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10090g0010
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AT3G03780 MS2, ATMS2 methionine synthase 2 0.04 Archaeplastida
AT5G17920 ATCIMS, ATMS1, ATMETS Cobalamin-independent synthase family protein 0.04 Archaeplastida
Cre03.g180750 No alias Amino acid metabolism.biosynthesis.aspartate... 0.04 Archaeplastida
GSVIVT01029971001 No alias Amino acid metabolism.biosynthesis.aspartate... 0.03 Archaeplastida
GSVIVT01037511001 No alias Amino acid metabolism.biosynthesis.aspartate... 0.03 Archaeplastida
LOC_Os12g42876.1 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.08 Archaeplastida
LOC_Os12g42884.1 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.03 Archaeplastida
Mp1g04570.1 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.03 Archaeplastida
Smo171028 No alias Amino acid metabolism.biosynthesis.aspartate... 0.04 Archaeplastida
Solyc10g081510.2.1 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.06 Archaeplastida
Zm00001e003281_P001 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.05 Archaeplastida
Zm00001e005228_P001 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.06 Archaeplastida
Zm00001e012368_P001 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0008652 cellular amino acid biosynthetic process IEA Interproscan
BP GO:0009086 methionine biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0004107 chorismate synthase activity IEP Neighborhood
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013215 Cbl-indep_Met_Synth_N 3 317
IPR002629 Met_Synth_C/arc 545 681
IPR002629 Met_Synth_C/arc 433 543
No external refs found!