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  5. AT5G04850

AT5G04850 (VPS60.2)


Aliases : VPS60.2

Description : SNF7 family protein


Gene families : OG0001852 (Archaeplastida) Phylogenetic Tree(s): OG0001852_tree ,
OG_05_0003381 (LandPlants) Phylogenetic Tree(s): OG_05_0003381_tree ,
OG_06_0003741 (SeedPlants) Phylogenetic Tree(s): OG_06_0003741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G04850
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Zm00001e029711_P001 No alias VPS60 associated protein of ESCRT-III complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0016192 vesicle-mediated transport ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000913 preprophase band assembly IEP Neighborhood
BP GO:0001676 long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0002213 defense response to insect IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004595 pantetheine-phosphate adenylyltransferase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006140 regulation of nucleotide metabolic process IEP Neighborhood
BP GO:0006301 postreplication repair IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006896 Golgi to vacuole transport IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
MF GO:0009940 amino-terminal vacuolar sorting propeptide binding IEP Neighborhood
BP GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid IEP Neighborhood
MF GO:0010209 vacuolar sorting signal binding IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
BP GO:0016032 viral process IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0030808 regulation of nucleotide biosynthetic process IEP Neighborhood
CC GO:0030863 cortical cytoskeleton IEP Neighborhood
BP GO:0030865 cortical cytoskeleton organization IEP Neighborhood
CC GO:0030981 cortical microtubule cytoskeleton IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0043200 response to amino acid IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044403 symbiont process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046786 viral replication complex formation and maintenance IEP Neighborhood
BP GO:0051196 regulation of coenzyme metabolic process IEP Neighborhood
BP GO:0062012 regulation of small molecule metabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0080020 regulation of coenzyme A biosynthetic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1900371 regulation of purine nucleotide biosynthetic process IEP Neighborhood
BP GO:1900542 regulation of purine nucleotide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 12 208
No external refs found!