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  5. MA_10157572g0010

MA_10157572g0010


Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 567.0)


Gene families : OG0020666 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0029002 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027429 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10157572g0010
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00180560 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 440 463
IPR032867 DYW_dom 538 662
IPR002885 Pentatricopeptide_repeat 331 362
IPR002885 Pentatricopeptide_repeat 163 210
IPR002885 Pentatricopeptide_repeat 365 411
IPR002885 Pentatricopeptide_repeat 264 311
No external refs found!