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  5. AT5G06150

AT5G06150 (CYCB1;2, CYC1BAT)


Aliases : CYCB1;2, CYC1BAT

Description : Cyclin family protein


Gene families : OG0000492 (Archaeplastida) Phylogenetic Tree(s): OG0000492_tree ,
OG_05_0000357 (LandPlants) Phylogenetic Tree(s): OG_05_0000357_tree ,
OG_06_0000555 (SeedPlants) Phylogenetic Tree(s): OG_06_0000555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G06150
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.04 Archaeplastida
AMTR_s00101p00131830 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 Archaeplastida
AT1G16330 CYCB3;1 cyclin b3;1 0.05 Archaeplastida
Cpa|evm.model.tig00000769.38 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.04 Archaeplastida
Cre08.g370401 No alias Cyclin-B2-2 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01009895001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 Archaeplastida
GSVIVT01025781001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 Archaeplastida
GSVIVT01036739001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 Archaeplastida
Gb_01761 No alias cyclin (CYCB) 0.02 Archaeplastida
Gb_09901 No alias Cyclin-B2-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g17402.1 No alias cyclin (CYCB) 0.02 Archaeplastida
LOC_Os01g59120.1 No alias cyclin (CYCB) 0.02 Archaeplastida
LOC_Os05g41390.1 No alias cyclin (CYCB) 0.02 Archaeplastida
MA_10428837g0030 No alias cyclin (CYCB) 0.04 Archaeplastida
MA_10433093g0020 No alias Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.04 Archaeplastida
MA_19215g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_311439g0010 No alias cyclin (CYCB) 0.04 Archaeplastida
MA_738195g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp5g10030.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Pp3c15_21520V3.1 No alias CYCLIN B2;4 0.05 Archaeplastida
Smo230742 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 Archaeplastida
Solyc01g009040.4.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Zm00001e007244_P001 No alias cyclin (CYCB) 0.02 Archaeplastida
Zm00001e019528_P002 No alias cyclin (CYCB) 0.03 Archaeplastida
Zm00001e025467_P001 No alias Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e027336_P001 No alias cyclin (CYCB) 0.04 Archaeplastida
Zm00001e028899_P002 No alias cyclin (CYCB) 0.03 Archaeplastida
Zm00001e030146_P001 No alias cyclin (CYCB) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0010332 response to gamma radiation IEP Interproscan
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity ISS Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
CC GO:0000307 cyclin-dependent protein kinase holoenzyme complex IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000798 nuclear cohesin complex IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
BP GO:0001933 negative regulation of protein phosphorylation IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005880 nuclear microtubule IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006469 negative regulation of protein kinase activity IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0007130 synaptonemal complex assembly IEP Neighborhood
BP GO:0007349 cellularization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
CC GO:0008278 cohesin complex IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009561 megagametogenesis IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010342 endosperm cellularization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018105 peptidyl-serine phosphorylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018209 peptidyl-serine modification IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030332 cyclin binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031400 negative regulation of protein modification process IEP Neighborhood
BP GO:0032204 regulation of telomere maintenance IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033673 negative regulation of kinase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035173 histone kinase activity IEP Neighborhood
MF GO:0035174 histone serine kinase activity IEP Neighborhood
MF GO:0035175 histone kinase activity (H3-S10 specific) IEP Neighborhood
BP GO:0035404 histone-serine phosphorylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0042326 negative regulation of phosphorylation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043247 telomere maintenance in response to DNA damage IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0043987 histone H3-S10 phosphorylation IEP Neighborhood
BP GO:0043988 histone H3-S28 phosphorylation IEP Neighborhood
MF GO:0044022 histone kinase activity (H3-S28 specific) IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0045936 negative regulation of phosphate metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051348 negative regulation of transferase activity IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0070193 synaptonemal complex organization IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0097472 cyclin-dependent protein kinase activity IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 312 427
IPR006671 Cyclin_N 185 309
No external refs found!