1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G07225

AT5G07225


Description : RING/U-box superfamily protein


Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0047814 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042645 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G07225
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00133270 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT5G52150 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G52155 No alias No description available 0.05 Archaeplastida
GSVIVT01008343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01014254001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01022110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_33701 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g005510.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
BP GO:0008360 regulation of cell shape IEP Neighborhood
BP GO:0009875 pollen-pistil interaction IEP Neighborhood
BP GO:0010160 formation of animal organ boundary IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0031221 arabinan metabolic process IEP Neighborhood
BP GO:0031222 arabinan catabolic process IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:2000029 regulation of proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 187 229
No external refs found!