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  5. MA_10331305g0010

MA_10331305g0010


Description : component RPA1 of RPA presynaptic filament assembly factor complex


Gene families : OG0002905 (Archaeplastida) Phylogenetic Tree(s): OG0002905_tree ,
OG_05_0005884 (LandPlants) Phylogenetic Tree(s): OG_05_0005884_tree ,
OG_06_0006620 (SeedPlants) Phylogenetic Tree(s): OG_06_0006620_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10331305g0010
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT5G08020 RPA70B, ATRPA70B RPA70-kDa subunit B 0.07 Archaeplastida
AT5G61000 RPA70D, ATRPA70D Replication factor-A protein 1-related 0.05 Archaeplastida
Cre16.g651000 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 Archaeplastida
GSVIVT01007849001 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.05 Archaeplastida
Gb_17349 No alias component RPA1 of single-stranded-DNA binding RPA... 0.08 Archaeplastida
LOC_Os03g11540.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.04 Archaeplastida
MA_10393806g0010 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.03 Archaeplastida
MA_177350g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.03 Archaeplastida
Mp2g17030.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.05 Archaeplastida
Pp3c1_20770V3.1 No alias RPA70-kDa subunit B 0.05 Archaeplastida
Solyc03g115050.3.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.07 Archaeplastida
Zm00001e000841_P002 No alias component RPA1 of single-stranded-DNA binding RPA... 0.03 Archaeplastida
Zm00001e038720_P001 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013955 Rep_factor-A_C 172 318
IPR031657 REPA_OB_2 27 119
No external refs found!