Coexpression cluster: Cluster_169 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044427 chromosomal part 10.0% (5/50) 5.44 0.0 1.5e-05
GO:0044815 DNA packaging complex 8.0% (4/50) 5.38 3e-06 6.1e-05
GO:0006333 chromatin assembly or disassembly 4.0% (2/50) 9.38 3e-06 6.2e-05
GO:0032993 protein-DNA complex 8.0% (4/50) 5.41 3e-06 6.7e-05
GO:0000786 nucleosome 8.0% (4/50) 5.41 3e-06 6.7e-05
GO:0009262 deoxyribonucleotide metabolic process 4.0% (2/50) 9.8 2e-06 7.3e-05
GO:0009263 deoxyribonucleotide biosynthetic process 4.0% (2/50) 9.8 2e-06 7.3e-05
GO:0003677 DNA binding 14.0% (7/50) 3.29 7e-06 0.000114
GO:0044446 intracellular organelle part 10.0% (5/50) 3.95 1.8e-05 0.000241
GO:0044422 organelle part 10.0% (5/50) 3.95 1.8e-05 0.000241
GO:0044424 intracellular part 14.0% (7/50) 2.94 3.3e-05 0.000392
GO:0044464 cell part 14.0% (7/50) 2.82 5.6e-05 0.000616
GO:0003676 nucleic acid binding 16.0% (8/50) 2.49 8e-05 0.000809
GO:0006139 nucleobase-containing compound metabolic process 10.0% (5/50) 3.24 0.000188 0.001774
GO:0046483 heterocycle metabolic process 10.0% (5/50) 3.07 0.000326 0.002872
GO:0006725 cellular aromatic compound metabolic process 10.0% (5/50) 3.02 0.000382 0.003152
GO:1901360 organic cyclic compound metabolic process 10.0% (5/50) 2.94 0.000481 0.003737
GO:0032991 protein-containing complex 10.0% (5/50) 2.87 0.000611 0.004479
GO:0034654 nucleobase-containing compound biosynthetic process 6.0% (3/50) 4.05 0.000818 0.00568
GO:0034641 cellular nitrogen compound metabolic process 10.0% (5/50) 2.6 0.001381 0.009114
GO:0018130 heterocycle biosynthetic process 6.0% (3/50) 3.69 0.001663 0.009976
GO:0006325 chromatin organization 4.0% (2/50) 5.08 0.001639 0.0103
GO:0019438 aromatic compound biosynthetic process 6.0% (3/50) 3.62 0.001918 0.01101
GO:0005664 nuclear origin of replication recognition complex 2.0% (1/50) 8.8 0.00225 0.012372
GO:1901362 organic cyclic compound biosynthetic process 6.0% (3/50) 3.37 0.003135 0.014271
GO:1901137 carbohydrate derivative biosynthetic process 4.0% (2/50) 4.63 0.003031 0.014287
GO:0009165 nucleotide biosynthetic process 4.0% (2/50) 4.68 0.002815 0.01429
GO:1901293 nucleoside phosphate biosynthetic process 4.0% (2/50) 4.68 0.002815 0.01429
GO:0000808 origin recognition complex 2.0% (1/50) 8.38 0.002998 0.014658
GO:0006275 regulation of DNA replication 2.0% (1/50) 8.06 0.003746 0.016484
GO:0051052 regulation of DNA metabolic process 2.0% (1/50) 7.8 0.004494 0.019136
GO:0009117 nucleotide metabolic process 4.0% (2/50) 4.23 0.005166 0.021311
GO:0006753 nucleoside phosphate metabolic process 4.0% (2/50) 4.18 0.005525 0.022099
GO:0090407 organophosphate biosynthetic process 4.0% (2/50) 4.15 0.005745 0.022304
GO:0006259 DNA metabolic process 4.0% (2/50) 4.05 0.006587 0.024842
GO:0090304 nucleic acid metabolic process 6.0% (3/50) 2.93 0.007282 0.025296
GO:0055086 nucleobase-containing small molecule metabolic process 4.0% (2/50) 3.99 0.00715 0.025508
GO:0044249 cellular biosynthetic process 8.0% (4/50) 2.4 0.007028 0.025768
GO:0006270 DNA replication initiation 2.0% (1/50) 6.92 0.008224 0.027835
GO:1901576 organic substance biosynthetic process 8.0% (4/50) 2.3 0.008869 0.028553
GO:0005575 cellular_component 14.0% (7/50) 1.57 0.008728 0.028801
GO:0003697 single-stranded DNA binding 2.0% (1/50) 6.68 0.009712 0.030524
GO:0044271 cellular nitrogen compound biosynthetic process 6.0% (3/50) 2.75 0.010083 0.030951
GO:0044454 nuclear chromosome part 2.0% (1/50) 6.57 0.010455 0.031366
GO:0005634 nucleus 4.0% (2/50) 3.67 0.010865 0.03187
GO:0019637 organophosphate metabolic process 4.0% (2/50) 3.62 0.01167 0.033488
GO:1901135 carbohydrate derivative metabolic process 4.0% (2/50) 3.57 0.012396 0.034088
GO:0009058 biosynthetic process 8.0% (4/50) 2.16 0.012336 0.034647
GO:0043227 membrane-bounded organelle 4.0% (2/50) 3.41 0.015373 0.040585
GO:0043231 intracellular membrane-bounded organelle 4.0% (2/50) 3.41 0.015373 0.040585
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_58 0.047 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_110 0.065 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_268 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_40 0.053 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_44 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_158 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_181 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.033 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_212 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.118 Archaeplastida Compare
Gingko biloba HCCA Cluster_50 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_90 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.037 Archaeplastida Compare
Gingko biloba HCCA Cluster_237 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_295 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_29 0.076 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.048 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_277 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_3 0.072 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.048 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_100 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_6 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_252 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_126 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_181 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_202 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_335 0.04 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.042 Archaeplastida Compare
Picea abies HCCA Cluster_423 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_519 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_92 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_184 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.044 Archaeplastida Compare
Oryza sativa HCCA Cluster_239 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_310 0.057 Archaeplastida Compare
Oryza sativa HCCA Cluster_340 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_7 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.032 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_204 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.059 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_120 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_140 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_159 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_265 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_281 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_26 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.081 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_186 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.045 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_110 0.046 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_112 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_157 0.022 Archaeplastida Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms