AT5G09780


Description : Transcriptional factor B3 family protein


Gene families : OG0012182 (Archaeplastida) Phylogenetic Tree(s): OG0012182_tree ,
OG_05_0012113 (LandPlants) Phylogenetic Tree(s): OG_05_0012113_tree ,
OG_06_0012958 (SeedPlants) Phylogenetic Tree(s): OG_06_0012958_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G09780
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT2G35310 No alias Transcriptional factor B3 family protein 0.04 Archaeplastida
AT5G18000 VDD VERDANDI 0.05 Archaeplastida
AT5G18090 No alias AP2/B3-like transcriptional factor family protein 0.05 Archaeplastida
GSVIVT01031850001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
BP GO:0010022 meristem determinacy IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0010321 regulation of vegetative phase change IEP Neighborhood
BP GO:0010582 floral meristem determinacy IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048658 anther wall tapetum development IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 19 113
IPR003340 B3_DNA-bd 220 297
No external refs found!