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  5. MA_10427183g0010

MA_10427183g0010


Description : component SMC3/TTN7 of cohesin regulator complex


Gene families : OG0005086 (Archaeplastida) Phylogenetic Tree(s): OG0005086_tree ,
OG_05_0006097 (LandPlants) Phylogenetic Tree(s): OG_05_0006097_tree ,
OG_06_0005481 (SeedPlants) Phylogenetic Tree(s): OG_06_0005481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427183g0010
Cluster HCCA: Cluster_478

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00198810 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.02 Archaeplastida
AT2G27170 TTN7, SMC3 Structural maintenance of chromosomes (SMC) family protein 0.02 Archaeplastida
Cre10.g445650 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.01 Archaeplastida
GSVIVT01033181001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.02 Archaeplastida
Solyc06g073780.4.1 No alias component SMC3/TTN7 of cohesin regulator complex 0.02 Archaeplastida
Zm00001e032592_P001 No alias component SMC3/TTN7 of cohesin regulator complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR010935 SMC_hinge 4 88
No external refs found!