Coexpression cluster: Cluster_478 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016458 gene silencing 3.66% (3/82) 7.44 1e-06 5.9e-05
GO:0031047 gene silencing by RNA 3.66% (3/82) 7.44 1e-06 5.9e-05
GO:0009892 negative regulation of metabolic process 3.66% (3/82) 6.73 3e-06 0.000114
GO:0010605 negative regulation of macromolecule metabolic process 3.66% (3/82) 6.73 3e-06 0.000114
GO:0010629 negative regulation of gene expression 3.66% (3/82) 6.79 3e-06 0.000165
GO:0016853 isomerase activity 4.88% (4/82) 4.47 3.5e-05 0.000791
GO:0090304 nucleic acid metabolic process 7.32% (6/82) 3.21 5e-05 0.00082
GO:0006396 RNA processing 4.88% (4/82) 4.55 2.8e-05 0.000848
GO:0016859 cis-trans isomerase activity 3.66% (3/82) 5.44 4.8e-05 0.000865
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 3.66% (3/82) 5.44 4.8e-05 0.000865
GO:0048519 negative regulation of biological process 3.66% (3/82) 5.61 3.4e-05 0.000878
GO:0016070 RNA metabolic process 6.1% (5/82) 3.47 9.4e-05 0.001423
GO:0009987 cellular process 19.51% (16/82) 1.45 0.000203 0.002841
GO:0006139 nucleobase-containing compound metabolic process 7.32% (6/82) 2.79 0.000245 0.003186
GO:0044217 other organism part 3.66% (3/82) 4.11 0.000727 0.005512
GO:0033643 host cell part 3.66% (3/82) 4.11 0.000727 0.005512
GO:0033646 host intracellular part 3.66% (3/82) 4.11 0.000727 0.005512
GO:0042025 host cell nucleus 3.66% (3/82) 4.11 0.000727 0.005512
GO:0033648 host intracellular membrane-bounded organelle 3.66% (3/82) 4.11 0.000727 0.005512
GO:0033647 host intracellular organelle 3.66% (3/82) 4.11 0.000727 0.005512
GO:0003723 RNA binding 4.88% (4/82) 3.3 0.000762 0.00555
GO:0046483 heterocycle metabolic process 7.32% (6/82) 2.61 0.000462 0.005611
GO:0006725 cellular aromatic compound metabolic process 7.32% (6/82) 2.56 0.000554 0.006303
GO:0051276 chromosome organization 2.44% (2/82) 5.76 0.000636 0.006813
GO:1901360 organic cyclic compound metabolic process 7.32% (6/82) 2.49 0.000722 0.007299
GO:0034641 cellular nitrogen compound metabolic process 7.32% (6/82) 2.15 0.00239 0.016727
GO:0006996 organelle organization 2.44% (2/82) 4.6 0.00314 0.021169
GO:0016573 histone acetylation 1.22% (1/82) 7.67 0.004914 0.031938
GO:0016598 protein arginylation 1.22% (1/82) 7.34 0.006138 0.032858
GO:0004057 arginyltransferase activity 1.22% (1/82) 7.34 0.006138 0.032858
GO:0006475 internal protein amino acid acetylation 1.22% (1/82) 7.34 0.006138 0.032858
GO:0018393 internal peptidyl-lysine acetylation 1.22% (1/82) 7.34 0.006138 0.032858
GO:0018394 peptidyl-lysine acetylation 1.22% (1/82) 7.34 0.006138 0.032858
GO:0043170 macromolecule metabolic process 12.2% (10/82) 1.32 0.006465 0.033616
GO:0043543 protein acylation 1.22% (1/82) 7.08 0.007361 0.035257
GO:0006473 protein acetylation 1.22% (1/82) 7.08 0.007361 0.035257
GO:0016755 transferase activity, transferring amino-acyl groups 1.22% (1/82) 7.08 0.007361 0.035257
GO:0044237 cellular metabolic process 13.41% (11/82) 1.26 0.006061 0.038038
GO:0005694 chromosome 1.22% (1/82) 6.86 0.008583 0.040055
GO:0003676 nucleic acid binding 8.54% (7/82) 1.58 0.009001 0.040953
GO:0004402 histone acetyltransferase activity 1.22% (1/82) 6.67 0.009803 0.043517
GO:0016043 cellular component organization 3.66% (3/82) 2.68 0.011772 0.046578
GO:0034212 peptide N-acetyltransferase activity 1.22% (1/82) 6.5 0.011022 0.046651
GO:0061733 peptide-lysine-N-acetyltransferase activity 1.22% (1/82) 6.5 0.011022 0.046651
GO:0005488 binding 24.39% (20/82) 0.75 0.011661 0.047163
GO:0006807 nitrogen compound metabolic process 12.2% (10/82) 1.2 0.011492 0.047534
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_59 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.035 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.043 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_193 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_220 0.038 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.037 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_152 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_41 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_140 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_310 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_322 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_346 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_354 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_363 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_132 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.051 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_208 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_277 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_332 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_360 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_364 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_535 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_112 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_336 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_141 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_26 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_62 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_247 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.049 Archaeplastida Compare
Vitis vinifera HCCA Cluster_24 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_49 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_54 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_106 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_180 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_210 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_232 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_62 0.027 Archaeplastida Compare
Sequences (82) (download table)

InterPro Domains

GO Terms

Family Terms