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MA_10427252g0010


Description : Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana (sp|q94kd0|ta15b_arath : 149.0)


Gene families : OG0005595 (Archaeplastida) Phylogenetic Tree(s): OG0005595_tree ,
OG_05_0004944 (LandPlants) Phylogenetic Tree(s): OG_05_0004944_tree ,
OG_06_0007789 (SeedPlants) Phylogenetic Tree(s): OG_06_0007789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427252g0010
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00073330 evm_27.TU.AmTr_v1... Transcription initiation factor TFIID subunit 15b... 0.07 Archaeplastida
AT5G58470 TAF15b TBP-associated factor 15B 0.07 Archaeplastida
LOC_Os01g07070.2 No alias Transcription initiation factor TFIID subunit 15b... 0.04 Archaeplastida
Mp7g03900.1 No alias Transcription initiation factor TFIID subunit 15b... 0.02 Archaeplastida
Pp3c12_3430V3.1 No alias TBP-associated factor 15B 0.03 Archaeplastida
Pp3c17_1620V3.1 No alias TBP-associated factor 15B 0.01 Archaeplastida
Solyc06g082220.4.1 No alias Transcription initiation factor TFIID subunit 15b... 0.02 Archaeplastida
Zm00001e016824_P001 No alias Transcription initiation factor TFIID subunit 15b... 0.04 Archaeplastida
Zm00001e025837_P001 No alias Transcription initiation factor TFIID subunit 15b... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Neighborhood
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Neighborhood
BP GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0034243 regulation of transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 317 346
IPR001876 Znf_RanBP2 70 99
No external refs found!