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Description : Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana (sp|q8ry25|nu98a_arath : 88.2)
Gene families : OG0001288 (Archaeplastida) Phylogenetic Tree(s): OG0001288_tree ,
OG_05_0032467 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0029810 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10427433g0010 | |
| Cluster | HCCA: Cluster_472 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G80680 | NUP96, PRE, SAR3, MOS3 | SUPPRESSOR OF AUXIN RESISTANCE 3 | 0.02 | Archaeplastida | |
| Cre02.g086887 | No alias | Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| LOC_Os12g06870.1 | No alias | NUP98 nucleoporin of nuclear pore complex | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004743 | pyruvate kinase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Neighborhood |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Neighborhood |
| BP | GO:0006096 | glycolytic process | IEP | Neighborhood |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006733 | oxidoreduction coenzyme metabolic process | IEP | Neighborhood |
| BP | GO:0006757 | ATP generation from ADP | IEP | Neighborhood |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Neighborhood |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009581 | detection of external stimulus | IEP | Neighborhood |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009583 | detection of light stimulus | IEP | Neighborhood |
| BP | GO:0009584 | detection of visible light | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
| MF | GO:0030955 | potassium ion binding | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| MF | GO:0031420 | alkali metal ion binding | IEP | Neighborhood |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0042866 | pyruvate biosynthetic process | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0046031 | ADP metabolic process | IEP | Neighborhood |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
| BP | GO:0051606 | detection of stimulus | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |