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  5. MA_10427782g0010

MA_10427782g0010


Description : large subunit of isopropylmalate isomerase heterodimer. large subunit of methylthioalkylmalate isomerase


Gene families : OG0003192 (Archaeplastida) Phylogenetic Tree(s): OG0003192_tree ,
OG_05_0005018 (LandPlants) Phylogenetic Tree(s): OG_05_0005018_tree ,
OG_06_0005508 (SeedPlants) Phylogenetic Tree(s): OG_06_0005508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427782g0010
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00083280 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.03 Archaeplastida
Cpa|evm.model.tig00021098.7 No alias Secondary metabolism.nitrogen-containing secondary... 0.01 Archaeplastida
Cpa|evm.model.tig00021098.8 No alias 3-isopropylmalate dehydratase large subunit,... 0.01 Archaeplastida
Solyc03g005730.4.1 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001030 Acoase/IPM_deHydtase_lsu_aba 2 154
No external refs found!