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  5. MA_10427843g0020

MA_10427843g0020


Description : RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana (sp|q8gz43|yzr3_arath : 140.0)


Gene families : OG0004588 (Archaeplastida) Phylogenetic Tree(s): OG0004588_tree ,
OG_05_0003728 (LandPlants) Phylogenetic Tree(s): OG_05_0003728_tree ,
OG_06_0003599 (SeedPlants) Phylogenetic Tree(s): OG_06_0003599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427843g0020
Cluster HCCA: Cluster_497

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00213220 evm_27.TU.AmTr_v1... RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01018266001 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_12718 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.04 Archaeplastida
Gb_38289 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.07 Archaeplastida
Pp3c4_8110V3.1 No alias Ran BP2/NZF zinc finger-like superfamily protein 0.02 Archaeplastida
Solyc05g015500.4.1 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e010397_P003 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021906_P002 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006177 GMP biosynthetic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042451 purine nucleoside biosynthetic process IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0046037 GMP metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 156 185
IPR001876 Znf_RanBP2 206 236
No external refs found!