1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G11620

AT5G11620


Description : SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related


Gene families : OG0007038 (Archaeplastida) Phylogenetic Tree(s): OG0007038_tree ,
OG_05_0008430 (LandPlants) Phylogenetic Tree(s): OG_05_0008430_tree ,
OG_06_0009567 (SeedPlants) Phylogenetic Tree(s): OG_06_0009567_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G11620
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00099260 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
Solyc08g066550.3.1 No alias no hits & (original description: none) 0.27 Archaeplastida
Zm00001e037240_P001 No alias no hits & (original description: none) 0.16 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004630 phospholipase D activity IEP Neighborhood
MF GO:0004816 asparagine-tRNA ligase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0006421 asparaginyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
BP GO:0010496 intercellular transport IEP Neighborhood
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016688 L-ascorbate peroxidase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032890 regulation of organic acid transport IEP Neighborhood
BP GO:0046466 membrane lipid catabolic process IEP Neighborhood
BP GO:0051952 regulation of amine transport IEP Neighborhood
BP GO:0051955 regulation of amino acid transport IEP Neighborhood
BP GO:0080143 regulation of amino acid export IEP Neighborhood
BP GO:0080165 callose deposition in phloem sieve plate IEP Neighborhood
BP GO:1903789 regulation of amino acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 59 87
No external refs found!