AT5G11840

Description : Protein of unknown function (DUF1230)

Gene families : OG0003069 (Archaeplastida) Phylogenetic Tree(s): OG0003069_tree ,
OG_05_0002537 (LandPlants) Phylogenetic Tree(s): OG_05_0002537_tree ,
OG_06_0002796 (SeedPlants) Phylogenetic Tree(s): OG_06_0002796_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G11840
Cluster	HCCA: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00144p00072420	evm_27.TU.AmTr_v1...	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,...	0.04	Archaeplastida
Cre05.g237050	No alias	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,...	0.02	Archaeplastida
GSVIVT01035410001	No alias	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,...	0.04	Archaeplastida
MA_157317g0010	No alias	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,...	0.02	Archaeplastida
MA_4893566g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
Pp3c19_4500V3.1	No alias	Protein of unknown function (DUF1230)	0.02	Archaeplastida
Pp3c21_280V3.1	No alias	Protein of unknown function (DUF1230)	0.03	Archaeplastida
Zm00001e026403_P001	No alias	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,...	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006787	porphyrin-containing compound catabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015994	chlorophyll metabolic process	None	Extended
BP	GO:0015996	chlorophyll catabolic process	RCA	Interproscan
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033015	tetrapyrrole catabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046149	pigment catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0051186	cofactor metabolic process	None	Extended
BP	GO:0051187	cofactor catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	Neighborhood
MF	GO:0000257	nitrilase activity	IEP	Neighborhood
MF	GO:0004161	dimethylallyltranstransferase activity	IEP	Neighborhood
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004605	phosphatidate cytidylyltransferase activity	IEP	Neighborhood
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0008506	sucrose:proton symporter activity	IEP	Neighborhood
MF	GO:0008515	sucrose transmembrane transporter activity	IEP	Neighborhood
CC	GO:0009526	plastid envelope	IEP	Neighborhood
CC	GO:0009528	plastid inner membrane	IEP	Neighborhood
CC	GO:0009532	plastid stroma	IEP	Neighborhood
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Neighborhood
CC	GO:0009570	chloroplast stroma	IEP	Neighborhood
CC	GO:0009579	thylakoid	IEP	Neighborhood
MF	GO:0009669	sucrose:cation symporter activity	IEP	Neighborhood
BP	GO:0009683	indoleacetic acid metabolic process	IEP	Neighborhood
BP	GO:0009684	indoleacetic acid biosynthetic process	IEP	Neighborhood
CC	GO:0009706	chloroplast inner membrane	IEP	Neighborhood
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	Neighborhood
BP	GO:0009850	auxin metabolic process	IEP	Neighborhood
BP	GO:0009851	auxin biosynthetic process	IEP	Neighborhood
BP	GO:0009908	flower development	IEP	Neighborhood
BP	GO:0009915	phloem sucrose loading	IEP	Neighborhood
CC	GO:0009941	chloroplast envelope	IEP	Neighborhood
BP	GO:0010044	response to aluminum ion	IEP	Neighborhood
BP	GO:0010109	regulation of photosynthesis	IEP	Neighborhood
BP	GO:0010189	vitamin E biosynthetic process	IEP	Neighborhood
BP	GO:0010232	vascular transport	IEP	Neighborhood
BP	GO:0010233	phloem transport	IEP	Neighborhood
MF	GO:0010276	phytol kinase activity	IEP	Neighborhood
CC	GO:0010287	plastoglobule	IEP	Neighborhood
BP	GO:0010322	regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Neighborhood
BP	GO:0010478	chlororespiration	IEP	Neighborhood
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	Neighborhood
MF	GO:0015154	disaccharide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015157	oligosaccharide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015203	polyamine transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015766	disaccharide transport	IEP	Neighborhood
BP	GO:0015770	sucrose transport	IEP	Neighborhood
BP	GO:0015772	oligosaccharide transport	IEP	Neighborhood
BP	GO:0015846	polyamine transport	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016815	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
MF	GO:0018822	nitrile hydratase activity	IEP	Neighborhood
BP	GO:0019252	starch biosynthetic process	IEP	Neighborhood
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Neighborhood
CC	GO:0019866	organelle inner membrane	IEP	Neighborhood
BP	GO:0022900	electron transport chain	IEP	Neighborhood
BP	GO:0022904	respiratory electron transport chain	IEP	Neighborhood
BP	GO:0031056	regulation of histone modification	IEP	Neighborhood
BP	GO:0031063	regulation of histone deacetylation	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0031279	regulation of cyclase activity	IEP	Neighborhood
BP	GO:0031647	regulation of protein stability	IEP	Neighborhood
CC	GO:0031967	organelle envelope	IEP	Neighborhood
CC	GO:0031969	chloroplast membrane	IEP	Neighborhood
CC	GO:0031975	envelope	IEP	Neighborhood
MF	GO:0032441	pheophorbide a oxygenase activity	IEP	Neighborhood
CC	GO:0034357	photosynthetic membrane	IEP	Neighborhood
BP	GO:0034754	cellular hormone metabolic process	IEP	Neighborhood
CC	GO:0042170	plastid membrane	IEP	Neighborhood
BP	GO:0042360	vitamin E metabolic process	IEP	Neighborhood
BP	GO:0042362	fat-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0042430	indole-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042435	indole-containing compound biosynthetic process	IEP	Neighborhood
CC	GO:0042651	thylakoid membrane	IEP	Neighborhood
BP	GO:0043085	positive regulation of catalytic activity	IEP	Neighborhood
MF	GO:0043394	proteoglycan binding	IEP	Neighborhood
BP	GO:0044093	positive regulation of molecular function	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044434	chloroplast part	IEP	Neighborhood
CC	GO:0044435	plastid part	IEP	Neighborhood
CC	GO:0044436	thylakoid part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0048367	shoot system development	IEP	Neighborhood
BP	GO:0048513	animal organ development	IEP	Neighborhood
BP	GO:0048731	system development	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0050821	protein stabilization	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
CC	GO:0055035	plastid thylakoid membrane	IEP	Neighborhood
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0055078	sodium ion homeostasis	IEP	Neighborhood
BP	GO:0061077	chaperone-mediated protein folding	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood
MF	GO:0070567	cytidylyltransferase activity	IEP	Neighborhood
BP	GO:0071071	regulation of phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0080005	photosystem stoichiometry adjustment	IEP	Neighborhood
MF	GO:0080061	indole-3-acetonitrile nitrilase activity	IEP	Neighborhood
MF	GO:0080109	indole-3-acetonitrile nitrile hydratase activity	IEP	Neighborhood
BP	GO:0090311	regulation of protein deacetylation	IEP	Neighborhood
BP	GO:0090567	reproductive shoot system development	IEP	Neighborhood
BP	GO:1902171	regulation of tocopherol cyclase activity	IEP	Neighborhood
BP	GO:1902275	regulation of chromatin organization	IEP	Neighborhood
BP	GO:1902395	regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood
BP	GO:1903725	regulation of phospholipid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR009631	CGLD27-like	61	204

External Links

No external refs found!

AT5G11840

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation