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  5. MA_10428588g0010

MA_10428588g0010


Description : no hits & (original description: none)


Gene families : OG0003310 (Archaeplastida) Phylogenetic Tree(s): OG0003310_tree ,
OG_05_0005383 (LandPlants) Phylogenetic Tree(s): OG_05_0005383_tree ,
OG_06_0006769 (SeedPlants) Phylogenetic Tree(s): OG_06_0006769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428588g0010
Cluster HCCA: Cluster_380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00066900 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT5G04670 No alias Enhancer of polycomb-like transcription factor protein 0.06 Archaeplastida
GSVIVT01034750001 No alias No description available 0.03 Archaeplastida
GSVIVT01035731001 No alias No description available 0.09 Archaeplastida
Gb_25776 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os02g01020.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g09190.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Pp3c11_12130V3.1 No alias Enhancer of polycomb-like transcription factor protein 0.13 Archaeplastida
Pp3c7_14100V3.1 No alias Enhancer of polycomb-like transcription factor protein 0.12 Archaeplastida
Smo444069 No alias No description available 0.04 Archaeplastida
Solyc07g053190.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc08g067920.3.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e016687_P004 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025916_P001 No alias no hits & (original description: none) 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR019542 Enhancer_polycomb-like_N 1505 1628
No external refs found!