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  5. AT5G12340

AT5G12340


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0001211 (Archaeplastida) Phylogenetic Tree(s): OG0001211_tree ,
OG_05_0000742 (LandPlants) Phylogenetic Tree(s): OG_05_0000742_tree ,
OG_06_0000399 (SeedPlants) Phylogenetic Tree(s): OG_06_0000399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G12340
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00245800 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00063p00151320 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G28190 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 Archaeplastida
GSVIVT01037265001 No alias No description available 0.06 Archaeplastida
Gb_10892 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_11824 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_26414 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g72360.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os03g24100.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g33050.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10248626g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10381881g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_118095g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_168522g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_311429g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5824616g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_74636g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_88642g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c1_38210V3.1 No alias No annotation 0.03 Archaeplastida
Solyc04g057830.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e011175_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e018591_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031559_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e038180_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0000210 NAD+ diphosphatase activity IEP Neighborhood
BP GO:0001666 response to hypoxia IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004551 nucleotide diphosphatase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008970 phospholipase A1 activity IEP Neighborhood
BP GO:0009061 anaerobic respiration IEP Neighborhood
BP GO:0009270 response to humidity IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009626 plant-type hypersensitive response IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009694 jasmonic acid metabolic process IEP Neighborhood
BP GO:0009695 jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009873 ethylene-activated signaling pathway IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010185 regulation of cellular defense response IEP Neighborhood
BP GO:0010186 positive regulation of cellular defense response IEP Neighborhood
BP GO:0010193 response to ozone IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010581 regulation of starch biosynthetic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0010962 regulation of glucan biosynthetic process IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP Neighborhood
MF GO:0017110 nucleoside-diphosphatase activity IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
MF GO:0019144 ADP-sugar diphosphatase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019433 triglyceride catabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031349 positive regulation of defense response IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP Neighborhood
BP GO:0033037 polysaccharide localization IEP Neighborhood
BP GO:0034050 host programmed cell death induced by symbiont IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0036293 response to decreased oxygen levels IEP Neighborhood
BP GO:0036294 cellular response to decreased oxygen levels IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
BP GO:0045793 positive regulation of cell size IEP Neighborhood
BP GO:0045947 negative regulation of translational initiation IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046461 neutral lipid catabolic process IEP Neighborhood
BP GO:0046464 acylglycerol catabolic process IEP Neighborhood
BP GO:0046503 glycerolipid catabolic process IEP Neighborhood
MF GO:0047631 ADP-ribose diphosphatase activity IEP Neighborhood
MF GO:0047714 galactolipase activity IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051552 flavone metabolic process IEP Neighborhood
BP GO:0051553 flavone biosynthetic process IEP Neighborhood
BP GO:0051554 flavonol metabolic process IEP Neighborhood
BP GO:0051555 flavonol biosynthetic process IEP Neighborhood
BP GO:0052542 defense response by callose deposition IEP Neighborhood
BP GO:0052545 callose localization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070212 protein poly-ADP-ribosylation IEP Neighborhood
BP GO:0070482 response to oxygen levels IEP Neighborhood
BP GO:0070887 cellular response to chemical stimulus IEP Neighborhood
BP GO:0071453 cellular response to oxygen levels IEP Neighborhood
BP GO:0071456 cellular response to hypoxia IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080041 ADP-ribose pyrophosphohydrolase activity IEP Neighborhood
MF GO:0080042 ADP-glucose pyrophosphohydrolase activity IEP Neighborhood
MF GO:0080046 quercetin 4'-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000904 regulation of starch metabolic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 38 199
No external refs found!