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  5. MA_10429054g0030

MA_10429054g0030


Description : Coatomer subunit alpha-1 OS=Arabidopsis thaliana (sp|q94a40|copa1_arath : 699.0)


Gene families : OG0002801 (Archaeplastida) Phylogenetic Tree(s): OG0002801_tree ,
OG_05_0092311 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0073083 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429054g0030
Cluster HCCA: Cluster_523

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00220200 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
AT1G62020 No alias Coatomer, alpha subunit 0.07 Archaeplastida
AT2G21390 No alias Coatomer, alpha subunit 0.08 Archaeplastida
Cpa|evm.model.tig00000144.152 No alias Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre13.g565850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
GSVIVT01009813001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
Gb_09624 No alias subunit alpha of coat protein complex 0.07 Archaeplastida
Gb_15817 No alias subunit alpha of coat protein complex 0.08 Archaeplastida
LOC_Os03g50340.1 No alias subunit alpha of coat protein complex 0.11 Archaeplastida
LOC_Os03g50350.1 No alias subunit alpha of coat protein complex 0.09 Archaeplastida
LOC_Os09g04110.1 No alias subunit alpha of coat protein complex 0.12 Archaeplastida
Mp3g00050.1 No alias subunit alpha of coat protein complex 0.13 Archaeplastida
Pp3c11_12600V3.1 No alias Coatomer, alpha subunit 0.03 Archaeplastida
Pp3c1_12990V3.1 No alias Coatomer, alpha subunit 0.07 Archaeplastida
Pp3c2_24120V3.1 No alias Coatomer, alpha subunit 0.04 Archaeplastida
Smo85610 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 Archaeplastida
Solyc04g080980.2.1 No alias subunit alpha of coat protein complex 0.09 Archaeplastida
Solyc07g032100.3.1 No alias subunit alpha of coat protein complex 0.05 Archaeplastida
Zm00001e005441_P001 No alias subunit alpha of coat protein complex 0.15 Archaeplastida
Zm00001e012192_P001 No alias subunit alpha of coat protein complex 0.14 Archaeplastida
Zm00001e016505_P002 No alias subunit alpha of coat protein complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR010714 Coatomer_asu_C 101 501
IPR006692 Coatomer_WD-assoc_reg 1 54
No external refs found!