MA_10429460g0020


Description : Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta (sp|q43784|ssg1_manes : 164.0)


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0022474 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021930 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429460g0020
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G11720 ATSS3, SS3 starch synthase 3 0.02 Archaeplastida
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.05 Archaeplastida
AT5G24300 SSI1, ATSS1, SSI Glycogen/starch synthases, ADP-glucose type 0.03 Archaeplastida
Cre04.g215150 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Archaeplastida
Cre06.g282000 No alias Carbohydrate metabolism.starch... 0.05 Archaeplastida
Cre12.g521700 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.01 Archaeplastida
Cre16.g663850 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 Archaeplastida
GSVIVT01012723001 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
GSVIVT01019680001 No alias Carbohydrate metabolism.starch... 0.04 Archaeplastida
LOC_Os05g45720.1 No alias starch synthase (SSIV) 0.03 Archaeplastida
LOC_Os06g06560.1 No alias starch synthase (SSI) 0.06 Archaeplastida
LOC_Os08g09230.1 No alias starch synthase (SSIII) 0.02 Archaeplastida
MA_10437241g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g23640.1 No alias granule-bound starch (amylose) synthase 0.07 Archaeplastida
Mp3g25350.1 No alias starch synthase (SSI) 0.04 Archaeplastida
Pp3c9_14980V3.1 No alias starch synthase 4 0.03 Archaeplastida
Solyc08g083320.4.1 No alias granule-bound starch (amylose) synthase 0.05 Archaeplastida
Zm00001e000007_P001 No alias Granule-bound starch synthase 1b,... 0.03 Archaeplastida
Zm00001e027473_P001 No alias starch synthase (SSIV) 0.03 Archaeplastida
Zm00001e030868_P001 No alias starch synthase (SSII) 0.02 Archaeplastida
Zm00001e039962_P001 No alias starch synthase (SSIII) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004133 glycogen debranching enzyme activity IEP Neighborhood
MF GO:0004134 4-alpha-glucanotransferase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 1 38
No external refs found!