1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10429460g0020

MA_10429460g0020


Description : Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta (sp|q43784|ssg1_manes : 164.0)


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0022474 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021930 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429460g0020
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G11720 ATSS3, SS3 starch synthase 3 0.02 Archaeplastida
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.05 Archaeplastida
AT5G24300 SSI1, ATSS1, SSI Glycogen/starch synthases, ADP-glucose type 0.03 Archaeplastida
Cre04.g215150 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Archaeplastida
Cre06.g282000 No alias Carbohydrate metabolism.starch... 0.05 Archaeplastida
Cre12.g521700 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.01 Archaeplastida
Cre16.g663850 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 Archaeplastida
GSVIVT01012723001 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
GSVIVT01019680001 No alias Carbohydrate metabolism.starch... 0.04 Archaeplastida
LOC_Os05g45720.1 No alias starch synthase (SSIV) 0.03 Archaeplastida
LOC_Os06g06560.1 No alias starch synthase (SSI) 0.06 Archaeplastida
LOC_Os08g09230.1 No alias starch synthase (SSIII) 0.02 Archaeplastida
MA_10437241g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g23640.1 No alias granule-bound starch (amylose) synthase 0.07 Archaeplastida
Mp3g25350.1 No alias starch synthase (SSI) 0.04 Archaeplastida
Pp3c9_14980V3.1 No alias starch synthase 4 0.03 Archaeplastida
Solyc08g083320.4.1 No alias granule-bound starch (amylose) synthase 0.05 Archaeplastida
Zm00001e000007_P001 No alias Granule-bound starch synthase 1b,... 0.03 Archaeplastida
Zm00001e027473_P001 No alias starch synthase (SSIV) 0.03 Archaeplastida
Zm00001e030868_P001 No alias starch synthase (SSII) 0.02 Archaeplastida
Zm00001e039962_P001 No alias starch synthase (SSIII) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004133 glycogen debranching enzyme activity IEP Neighborhood
MF GO:0004134 4-alpha-glucanotransferase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 1 38
No external refs found!