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  5. MA_10429620g0010

MA_10429620g0010


Description : tRNA guanosine-methyltransferase (TRM3)


Gene families : OG0003811 (Archaeplastida) Phylogenetic Tree(s): OG0003811_tree ,
OG_05_0008400 (LandPlants) Phylogenetic Tree(s): OG_05_0008400_tree ,
OG_06_0007804 (SeedPlants) Phylogenetic Tree(s): OG_06_0007804_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429620g0010
Cluster HCCA: Cluster_478

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00163320 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT4G17610 No alias tRNA/rRNA methyltransferase (SpoU) family protein 0.04 Archaeplastida
Cpa|evm.model.tig00020812.9 No alias No description available 0.01 Archaeplastida
Cre01.g027350 No alias RNA processing.RNA modification.rRNA/tRNA... 0.01 Archaeplastida
Gb_26193 No alias tRNA guanosine-methyltransferase (TRM3) 0.04 Archaeplastida
Mp3g08720.1 No alias tRNA guanosine-methyltransferase (TRM3) 0.02 Archaeplastida
Solyc08g077850.2.1 No alias tRNA guanosine-methyltransferase (TRM3) 0.04 Archaeplastida
Zm00001e000019_P001 No alias tRNA guanosine-methyltransferase (TRM3) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030688 preribosome, small subunit precursor IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
InterPro domains Description Start Stop
IPR001537 SpoU_MeTrfase 187 328
No external refs found!