Description : tRNA guanosine-methyltransferase (TRM3)
Gene families : OG0003811 (Archaeplastida) Phylogenetic Tree(s): OG0003811_tree ,
OG_05_0008400 (LandPlants) Phylogenetic Tree(s): OG_05_0008400_tree ,
OG_06_0007804 (SeedPlants) Phylogenetic Tree(s): OG_06_0007804_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_10429620g0010 | |
Cluster | HCCA: Cluster_478 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00163320 | evm_27.TU.AmTr_v1... | No description available | 0.03 | Archaeplastida | |
AT4G17610 | No alias | tRNA/rRNA methyltransferase (SpoU) family protein | 0.04 | Archaeplastida | |
Cpa|evm.model.tig00020812.9 | No alias | No description available | 0.01 | Archaeplastida | |
Cre01.g027350 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.01 | Archaeplastida | |
Gb_26193 | No alias | tRNA guanosine-methyltransferase (TRM3) | 0.04 | Archaeplastida | |
Mp3g08720.1 | No alias | tRNA guanosine-methyltransferase (TRM3) | 0.02 | Archaeplastida | |
Solyc08g077850.2.1 | No alias | tRNA guanosine-methyltransferase (TRM3) | 0.04 | Archaeplastida | |
Zm00001e000019_P001 | No alias | tRNA guanosine-methyltransferase (TRM3) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0006396 | RNA processing | IEA | Interproscan |
MF | GO:0008173 | RNA methyltransferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
BP | GO:0016458 | gene silencing | IEP | Neighborhood |
MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
CC | GO:0033643 | host cell part | IEP | Neighborhood |
CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
CC | GO:0044217 | other organism part | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001537 | SpoU_MeTrfase | 187 | 328 |
No external refs found! |