MA_10429891g0010

Description : transcription factor (SBP)

Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10429891g0010
Cluster	HCCA: Cluster_328

Target	Alias	Description	ECC score	Gene Family Method
AT1G02065	SPL8	squamosa promoter binding protein-like 8	0.03	Archaeplastida
AT1G69170	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Archaeplastida
GSVIVT01003836001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.02	Archaeplastida
GSVIVT01018204001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.04	Archaeplastida
Gb_15605	No alias	transcription factor (SBP)	0.02	Archaeplastida
Gb_22010	No alias	transcription factor (SBP)	0.02	Archaeplastida
LOC_Os04g46580.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
LOC_Os07g32170.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
LOC_Os08g39890.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
LOC_Os09g31438.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
Mp1g10020.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
Solyc05g015510.3.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
Solyc07g062980.4.1	No alias	transcription factor (SBP)	0.05	Archaeplastida
Solyc10g009080.4.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc10g018780.3.1	No alias	transcription factor (SBP)	0.03	Archaeplastida
Zm00001e025234_P001	No alias	transcription factor (SBP)	0.02	Archaeplastida
Zm00001e034537_P001	No alias	transcription factor (SBP)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	5	85

External Links

No external refs found!