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  5. MA_10431517g0010

MA_10431517g0010


Description : subunit beta of cargo adaptor F-subcomplex


Gene families : OG0003156 (Archaeplastida) Phylogenetic Tree(s): OG0003156_tree ,
OG_05_0003042 (LandPlants) Phylogenetic Tree(s): OG_05_0003042_tree ,
OG_06_0029864 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431517g0010
Cluster HCCA: Cluster_409

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00238440 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.09 Archaeplastida
AT4G31480 No alias Coatomer, beta subunit 0.08 Archaeplastida
AT4G31490 No alias Coatomer, beta subunit 0.07 Archaeplastida
Cpa|evm.model.tig00020553.156 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Cre04.g217921 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
GSVIVT01035511001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
Gb_03760 No alias subunit beta of cargo adaptor F-subcomplex 0.06 Archaeplastida
Gb_23100 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Archaeplastida
LOC_Os01g17430.1 No alias subunit beta of cargo adaptor F-subcomplex 0.08 Archaeplastida
LOC_Os11g07280.1 No alias subunit beta of cargo adaptor F-subcomplex 0.05 Archaeplastida
Mp5g08450.1 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Archaeplastida
Pp3c25_10770V3.1 No alias Coatomer, beta subunit 0.05 Archaeplastida
Pp3c6_720V3.1 No alias Coatomer, beta subunit 0.05 Archaeplastida
Pp3c7_8430V3.1 No alias Coatomer, beta subunit 0.05 Archaeplastida
Solyc01g007150.3.1 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Archaeplastida
Solyc10g081920.2.1 No alias subunit beta of cargo adaptor F-subcomplex 0.03 Archaeplastida
Zm00001e009041_P001 No alias subunit beta of cargo adaptor F-subcomplex 0.1 Archaeplastida
Zm00001e017416_P001 No alias subunit beta of cargo adaptor F-subcomplex 0.12 Archaeplastida
Zm00001e025465_P001 No alias subunit beta of cargo adaptor F-subcomplex 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004133 glycogen debranching enzyme activity IEP Neighborhood
MF GO:0004134 4-alpha-glucanotransferase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011710 Coatomer_bsu_C 419 557
IPR002553 Clathrin/coatomer_adapt-like_N 2 223
IPR029446 COPB1_appendage_platform_dom 564 613
No external refs found!