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  5. MA_10431670g0010

MA_10431670g0010


Description : DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thaliana (sp|f4kfv7|suv3l_arath : 765.0)


Gene families : OG0002220 (Archaeplastida) Phylogenetic Tree(s): OG0002220_tree ,
OG_05_0004290 (LandPlants) Phylogenetic Tree(s): OG_05_0004290_tree ,
OG_06_0004225 (SeedPlants) Phylogenetic Tree(s): OG_06_0004225_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431670g0010
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271940 evm_27.TU.AmTr_v1... ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza... 0.02 Archaeplastida
AMTR_s00010p00259590 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH18,... 0.02 Archaeplastida
GSVIVT01011395001 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.07 Archaeplastida
Gb_39537 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.03 Archaeplastida
LOC_Os03g53500.1 No alias ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza... 0.01 Archaeplastida
LOC_Os04g38630.1 No alias ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza... 0.05 Archaeplastida
Mp6g01600.1 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.02 Archaeplastida
Solyc11g011460.2.1 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.04 Archaeplastida
Zm00001e007912_P001 No alias ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 437 543
No external refs found!