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  5. MA_10431843g0010

MA_10431843g0010


Description : component RPS18 of SSU proteome


Gene families : OG0001796 (Archaeplastida) Phylogenetic Tree(s): OG0001796_tree ,
OG_05_0001726 (LandPlants) Phylogenetic Tree(s): OG_05_0001726_tree ,
OG_06_0002411 (SeedPlants) Phylogenetic Tree(s): OG_06_0002411_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431843g0010
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00178430 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
AT1G22780 RPS18A, PFL, PFL1 Ribosomal protein S13/S18 family 0.12 Archaeplastida
AT1G34030 No alias Ribosomal protein S13/S18 family 0.09 Archaeplastida
AT4G09800 RPS18C S18 ribosomal protein 0.08 Archaeplastida
Cre06.g272950 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 Archaeplastida
GSVIVT01017975001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
GSVIVT01034582001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Gb_21599 No alias component RPS18 of SSU proteome 0.03 Archaeplastida
LOC_Os03g58050.1 No alias component RPS18 of SSU proteome 0.12 Archaeplastida
Mp1g07420.1 No alias component RPS18 of SSU proteome 0.17 Archaeplastida
Mp5g02820.1 No alias component RPS18 of SSU proteome 0.2 Archaeplastida
Pp3c16_2090V3.1 No alias Ribosomal protein S13/S18 family 0.17 Archaeplastida
Pp3c25_1240V3.1 No alias Ribosomal protein S13/S18 family 0.06 Archaeplastida
Pp3c25_1430V3.1 No alias Ribosomal protein S13/S18 family 0.09 Archaeplastida
Pp3c5_2800V3.1 No alias Ribosomal protein S13/S18 family 0.06 Archaeplastida
Pp3c6_21770V3.1 No alias Ribosomal protein S13/S18 family 0.13 Archaeplastida
Pp3c6_21830V3.1 No alias Ribosomal protein S13/S18 family 0.04 Archaeplastida
Smo267619 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
Solyc03g078290.3.1 No alias component RPS18 of SSU proteome 0.17 Archaeplastida
Solyc06g073370.4.1 No alias component RPS18 of SSU proteome 0.15 Archaeplastida
Solyc11g005680.2.1 No alias component RPS18 of SSU proteome 0.08 Archaeplastida
Zm00001e005967_P001 No alias component RPS18 of SSU proteome 0.21 Archaeplastida
Zm00001e011880_P001 No alias component RPS18 of SSU proteome 0.17 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006480 N-terminal protein amino acid methylation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 14 142
No external refs found!