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  5. MA_10432248g0010

MA_10432248g0010


Description : protein factor PRPF3 of U4/U6 small nuclear ribonucleoprotein particle (snRNP). protein factors (PRPF3) of U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG0005546 (Archaeplastida) Phylogenetic Tree(s): OG0005546_tree ,
OG_05_0005789 (LandPlants) Phylogenetic Tree(s): OG_05_0005789_tree ,
OG_06_0007197 (SeedPlants) Phylogenetic Tree(s): OG_06_0007197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432248g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AT1G28060 No alias Pre-mRNA-splicing factor 3 0.04 Archaeplastida
Cpa|evm.model.tig00020816.63 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.01 Archaeplastida
GSVIVT01032624001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 Archaeplastida
Pp3c14_26820V3.1 No alias Pre-mRNA-splicing factor 3 0.04 Archaeplastida
Solyc06g036580.4.1 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.07 Archaeplastida
Zm00001e014268_P001 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.05 Archaeplastida
Zm00001e024816_P001 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR010541 DUF1115 563 686
IPR013881 Pre-mRNA_splic_Prp3 311 538
No external refs found!