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  5. MA_10432531g0020

MA_10432531g0020


Description : no hits & (original description: none)


Gene families : OG0001780 (Archaeplastida) Phylogenetic Tree(s): OG0001780_tree ,
OG_05_0010118 (LandPlants) Phylogenetic Tree(s): OG_05_0010118_tree ,
OG_06_0008665 (SeedPlants) Phylogenetic Tree(s): OG_06_0008665_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432531g0020
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00109950 evm_27.TU.AmTr_v1... Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G28420 HB-1 homeobox-1 0.03 Archaeplastida
AT4G12750 No alias Homeodomain-like transcriptional regulator 0.03 Archaeplastida
GSVIVT01036776001 No alias Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os05g48820.1 No alias HOX-like transcription factor 0.02 Archaeplastida
LOC_Os07g42750.1 No alias Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c16_15110V3.1 No alias homeobox-1 0.02 Archaeplastida
Solyc02g077660.3.1 No alias HOX-like transcription factor 0.03 Archaeplastida
Zm00001e020198_P001 No alias HOX-like transcription factor 0.02 Archaeplastida
Zm00001e028032_P001 No alias HOX-like transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004819 glutamine-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!