Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0002311 (SeedPlants) Phylogenetic Tree(s): OG_06_0002311_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_10432580g0010 | |
Cluster | HCCA: Cluster_238 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00200760 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
AMTR_s00021p00221770 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
AMTR_s00029p00157690 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.04 | Archaeplastida | |
AT1G30330 | ARF6 | auxin response factor 6 | 0.03 | Archaeplastida | |
AT1G59750 | ARF1 | auxin response factor 1 | 0.05 | Archaeplastida | |
AT2G46530 | ARF11 | auxin response factor 11 | 0.03 | Archaeplastida | |
AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.05 | Archaeplastida | |
GSVIVT01008639001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01021552001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.06 | Archaeplastida | |
GSVIVT01021553001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
GSVIVT01023149001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
Gb_12414 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Gb_23186 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Gb_23328 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Gb_39686 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os01g70270.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
LOC_Os02g41800.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
LOC_Os04g36054.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os04g56850.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os05g48870.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
LOC_Os06g47150.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os11g32110.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os12g29520.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
MA_10022392g0010 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Pp3c13_4720V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
Pp3c4_12970V3.1 | No alias | auxin response factor 16 | 0.02 | Archaeplastida | |
Pp3c5_9420V3.1 | No alias | auxin response factor 2 | 0.03 | Archaeplastida | |
Solyc01g096070.3.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Solyc02g077560.3.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Solyc05g047460.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Solyc08g008380.4.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Solyc11g069190.2.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Zm00001e006640_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e018126_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e021527_P006 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Zm00001e028396_P001 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Neighborhood |
MF | GO:0004133 | glycogen debranching enzyme activity | IEP | Neighborhood |
MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
MF | GO:0004834 | tryptophan synthase activity | IEP | Neighborhood |
MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006568 | tryptophan metabolic process | IEP | Neighborhood |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Neighborhood |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
BP | GO:0007186 | G-protein coupled receptor signaling pathway | IEP | Neighborhood |
MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
MF | GO:0016836 | hydro-lyase activity | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Neighborhood |
MF | GO:0030695 | GTPase regulator activity | IEP | Neighborhood |
MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044106 | cellular amine metabolic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
No external refs found! |