AT5G17300 (RVE1)


Aliases : RVE1

Description : Homeodomain-like superfamily protein


Gene families : OG0000637 (Archaeplastida) Phylogenetic Tree(s): OG0000637_tree ,
OG_05_0000630 (LandPlants) Phylogenetic Tree(s): OG_05_0000630_tree ,
OG_06_0000581 (SeedPlants) Phylogenetic Tree(s): OG_06_0000581_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G17300
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00072910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.12 Archaeplastida
Cre06.g275350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01027456001 No alias Multi-process regulation.circadian clock.core oscillator... 0.05 Archaeplastida
GSVIVT01035231001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.1 Archaeplastida
Gb_25658 No alias transcription factor (MYB-related). circadian clock core... 0.07 Archaeplastida
Gb_28874 No alias transcription factor (MYB-related). circadian clock core... 0.04 Archaeplastida
LOC_Os06g01670.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.03 Archaeplastida
LOC_Os06g51260.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_11267g0020 No alias transcription factor (MYB-related). circadian clock core... 0.06 Archaeplastida
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.02 Archaeplastida
Solyc02g036370.3.1 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Solyc03g098320.4.1 No alias transcription factor (MYB-related) 0.13 Archaeplastida
Solyc10g084370.3.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.12 Archaeplastida
Zm00001e013333_P002 No alias transcription factor (MYB-related) 0.09 Archaeplastida
Zm00001e023232_P002 No alias transcription factor (MYB-related). REVEILLE circadian... 0.07 Archaeplastida
Zm00001e041379_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IMP Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0007623 circadian rhythm IEP Interproscan
BP GO:0007623 circadian rhythm RCA Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009723 response to ethylene RCA Interproscan
BP GO:0009733 response to auxin RCA Interproscan
BP GO:0009734 auxin-activated signaling pathway IMP Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0009739 response to gibberellin RCA Interproscan
BP GO:0009751 response to salicylic acid RCA Interproscan
BP GO:0009753 response to jasmonic acid RCA Interproscan
BP GO:0009851 auxin biosynthetic process IMP Interproscan
BP GO:0010600 regulation of auxin biosynthetic process IMP Interproscan
BP GO:0048574 long-day photoperiodism, flowering RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006598 polyamine catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008655 pyrimidine-containing compound salvage IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009838 abscission IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009954 proximal/distal pattern formation IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010100 negative regulation of photomorphogenesis IEP Neighborhood
BP GO:0010118 stomatal movement IEP Neighborhood
BP GO:0010227 floral organ abscission IEP Neighborhood
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP Neighborhood
MF GO:0015205 nucleobase transmembrane transporter activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
MF GO:0019904 protein domain specific binding IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
BP GO:0032922 circadian regulation of gene expression IEP Neighborhood
BP GO:0032958 inositol phosphate biosynthetic process IEP Neighborhood
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0042752 regulation of circadian rhythm IEP Neighborhood
BP GO:0042754 negative regulation of circadian rhythm IEP Neighborhood
BP GO:0043100 pyrimidine nucleobase salvage IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043393 regulation of protein binding IEP Neighborhood
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEP Neighborhood
BP GO:0043496 regulation of protein homodimerization activity IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0043966 histone H3 acetylation IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Neighborhood
BP GO:0051098 regulation of binding IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:2000030 regulation of response to red or far red light IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 55 98
No external refs found!