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  5. MA_10434773g0030

MA_10434773g0030


Description : pectin methylesterase


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0015961 (LandPlants) Phylogenetic Tree(s): OG_05_0015961_tree ,
OG_06_0015733 (SeedPlants) Phylogenetic Tree(s): OG_06_0015733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434773g0030
Cluster HCCA: Cluster_378

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT5G07410 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01033712001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
LOC_Os05g44600.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os12g37660.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp2g01420.1 No alias pectin methylesterase 0.03 Archaeplastida
Mp3g01170.1 No alias pectin methylesterase 0.03 Archaeplastida
Mp5g03920.1 No alias pectin methylesterase 0.04 Archaeplastida
Mp5g03930.1 No alias pectin methylesterase 0.04 Archaeplastida
Pp3c3_32350V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Zm00001e002891_P001 No alias pectin methylesterase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006751 glutathione catabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016842 amidine-lyase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0042219 cellular modified amino acid catabolic process IEP Neighborhood
BP GO:0043171 peptide catabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 104 345
No external refs found!