AT5G18450

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000734 (SeedPlants) Phylogenetic Tree(s): OG_06_0000734_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G18450
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00007p00268280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00009p00147970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
AMTR_s00025p00249140	evm_27.TU.AmTr_v1...	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.04	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT1G63030	ddf2	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT2G20880	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G31230	ATERF15, ERF15	ethylene-responsive element binding factor 15	0.04	Archaeplastida
AT4G28140	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G21960	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G44210	ATERF-9, ERF9, ATERF9	erf domain protein 9	0.03	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.03	Archaeplastida
Cre16.g649433	No alias	No description available	0.02	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01013924001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013935001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01021060001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031747001	No alias	Alpha-amylase type B isozyme OS=Hordeum vulgare	0.03	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_00745	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_11793	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_17122	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_38187	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_41294	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g73770.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os02g13710.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g34260.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os02g34270.1	No alias	Ethylene-responsive transcription factor ERF114...	0.06	Archaeplastida
LOC_Os02g43790.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os02g54050.1	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Archaeplastida
LOC_Os02g55380.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g32620.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g34970.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os06g07030.1	No alias	transcription factor (DREB)	0.1	Archaeplastida
LOC_Os07g12510.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os07g47330.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os08g45110.1	No alias	transcription factor (DREB)	0.11	Archaeplastida
LOC_Os09g11480.2	No alias	Ethylene-responsive transcription factor ERF112...	0.06	Archaeplastida
MA_132427g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_134453g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_162045g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_164803g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c10_11910V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c11_24520V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c2_15730V3.1	No alias	cytokinin response factor 5	0.04	Archaeplastida
Pp3c4_31920V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c7_20200V3.1	No alias	ethylene responsive element binding factor 2	0.03	Archaeplastida
Smo73155	No alias	Ethylene-responsive transcription factor ERF013...	0.04	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g009440.3.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc01g067540.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.06	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g077360.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g077840.2.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc02g090790.1.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g050750.2.1	No alias	transcription factor (DREB)	0.08	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g042580.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e003707_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e003858_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e004208_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e006139_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e007351_P001	No alias	transcription factor (ERF)	0.08	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e020274_P001	No alias	transcription factor (ERF)	0.1	Archaeplastida
Zm00001e023078_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
Zm00001e026989_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	Archaeplastida
Zm00001e031783_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e036401_P001	No alias	transcription factor (DREB)	0.09	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e041781_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006721	terpenoid metabolic process	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
MF	GO:0008794	arsenate reductase (glutaredoxin) activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009266	response to temperature stimulus	IEP	Neighborhood
BP	GO:0009409	response to cold	IEP	Neighborhood
BP	GO:0009639	response to red or far red light	IEP	Neighborhood
BP	GO:0009640	photomorphogenesis	IEP	Neighborhood
BP	GO:0009685	gibberellin metabolic process	IEP	Neighborhood
BP	GO:0009686	gibberellin biosynthetic process	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009735	response to cytokinin	IEP	Neighborhood
BP	GO:0009737	response to abscisic acid	IEP	Neighborhood
BP	GO:0009739	response to gibberellin	IEP	Neighborhood
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009756	carbohydrate mediated signaling	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0009845	seed germination	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0009933	meristem structural organization	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010162	seed dormancy process	IEP	Neighborhood
BP	GO:0010182	sugar mediated signaling pathway	IEP	Neighborhood
BP	GO:0010187	negative regulation of seed germination	IEP	Neighborhood
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Neighborhood
BP	GO:0010431	seed maturation	IEP	Neighborhood
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
BP	GO:0016101	diterpenoid metabolic process	IEP	Neighborhood
BP	GO:0016102	diterpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016114	terpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
BP	GO:0019915	lipid storage	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
BP	GO:0022611	dormancy process	IEP	Neighborhood
MF	GO:0030611	arsenate reductase activity	IEP	Neighborhood
MF	GO:0030613	oxidoreductase activity, acting on phosphorus or arsenic in donors	IEP	Neighborhood
MF	GO:0030614	oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor	IEP	Neighborhood
BP	GO:0031407	oxylipin metabolic process	IEP	Neighborhood
BP	GO:0031408	oxylipin biosynthetic process	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032870	cellular response to hormone stimulus	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
BP	GO:0034389	lipid droplet organization	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0042446	hormone biosynthetic process	IEP	Neighborhood
CC	GO:0042735	protein body	IEP	Neighborhood
MF	GO:0043424	protein histidine kinase binding	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0048366	leaf development	IEP	Neighborhood
BP	GO:0048532	anatomical structure arrangement	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048609	multicellular organismal reproductive process	IEP	Neighborhood
BP	GO:0048825	cotyledon development	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0050826	response to freezing	IEP	Neighborhood
BP	GO:0051235	maintenance of location	IEP	Neighborhood
BP	GO:0051239	regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051301	cell division	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
MF	GO:0070524	11-beta-hydroxysteroid dehydrogenase (NADP+) activity	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0070887	cellular response to chemical stimulus	IEP	Neighborhood
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	Neighborhood
BP	GO:0071229	cellular response to acid chemical	IEP	Neighborhood
BP	GO:0071310	cellular response to organic substance	IEP	Neighborhood
BP	GO:0071396	cellular response to lipid	IEP	Neighborhood
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Neighborhood
MF	GO:0071614	linoleic acid epoxygenase activity	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
MF	GO:0072555	17-beta-ketosteroid reductase activity	IEP	Neighborhood
MF	GO:0072582	17-beta-hydroxysteroid dehydrogenase (NADP+) activity	IEP	Neighborhood
BP	GO:0097305	response to alcohol	IEP	Neighborhood
BP	GO:0097306	cellular response to alcohol	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	34	83

External Links

No external refs found!

AT5G18450

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation