1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10435282g0010

MA_10435282g0010


Description : C3H zinc finger transcription factor


Gene families : OG0000421 (Archaeplastida) Phylogenetic Tree(s): OG0000421_tree ,
OG_05_0000820 (LandPlants) Phylogenetic Tree(s): OG_05_0000820_tree ,
OG_06_0001649 (SeedPlants) Phylogenetic Tree(s): OG_06_0001649_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435282g0010
Cluster HCCA: Cluster_534

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00248880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 Archaeplastida
Cre16.g689535 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 Archaeplastida
LOC_Os01g68860.1 No alias C3H zinc finger transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 79 103
IPR000571 Znf_CCCH 389 413
IPR000571 Znf_CCCH 168 192
IPR000571 Znf_CCCH 342 366
IPR000571 Znf_CCCH 124 147
No external refs found!