Description : F-box/FBD-like domains containing protein

Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT5G18770
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT1G16940 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT1G78760 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.06 Archaeplastida
AT5G22670 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006259 DNA metabolic process RCA Interproscan
BP GO:0007062 sister chromatid cohesion RCA Interproscan
BP GO:0007131 reciprocal meiotic recombination RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0033044 regulation of chromosome organization RCA Interproscan
BP GO:0042138 meiotic DNA double-strand break formation RCA Interproscan
BP GO:0045132 meiotic chromosome segregation RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000280 nuclear division IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016929 SUMO-specific protease activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 26 63
IPR013101 Leu-rich_rpt_2 177 202
IPR006566 FBD 386 428
No external refs found!