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  5. AT5G19080

AT5G19080


Description : RING/U-box superfamily protein


Gene families : OG0001224 (Archaeplastida) Phylogenetic Tree(s): OG0001224_tree ,
OG_05_0001305 (LandPlants) Phylogenetic Tree(s): OG_05_0001305_tree ,
OG_06_0001650 (SeedPlants) Phylogenetic Tree(s): OG_06_0001650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G19080
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00085190 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00000144.129 No alias No description available 0.02 Archaeplastida
Cre03.g173900 No alias Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre09.g399439 No alias No description available 0.02 Archaeplastida
GSVIVT01025175001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_39665 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g33000.2 No alias Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os10g13670.1 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.01 Archaeplastida
Solyc01g098750.3.1 No alias Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000026 alpha-1,2-mannosyltransferase activity IEP Neighborhood
MF GO:0000030 mannosyltransferase activity IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004376 glycolipid mannosyltransferase activity IEP Neighborhood
MF GO:0004377 GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEP Neighborhood
MF GO:0004448 isocitrate dehydrogenase activity IEP Neighborhood
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity IEP Neighborhood
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP Neighborhood
MF GO:0004644 phosphoribosylglycinamide formyltransferase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
MF GO:0008864 formyltetrahydrofolate deformylase activity IEP Neighborhood
BP GO:0009061 anaerobic respiration IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0016629 12-oxophytodienoate reductase activity IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0030148 sphingolipid biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Neighborhood
CC GO:0031501 mannosyltransferase complex IEP Neighborhood
CC GO:0033185 dolichol-phosphate-mannose synthase complex IEP Neighborhood
BP GO:0036503 ERAD pathway IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
MF GO:0045140 inositol phosphoceramide synthase activity IEP Neighborhood
MF GO:0070300 phosphatidic acid binding IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
MF GO:0080045 quercetin 3'-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080148 negative regulation of response to water deprivation IEP Neighborhood
BP GO:0080186 developmental vegetative growth IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:2000070 regulation of response to water deprivation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!