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Description : RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase
Gene families : OG0000720 (Archaeplastida) Phylogenetic Tree(s): OG0000720_tree ,
OG_05_0003700 (LandPlants) Phylogenetic Tree(s): OG_05_0003700_tree ,
OG_06_0004180 (SeedPlants) Phylogenetic Tree(s): OG_06_0004180_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10435719g0010 | |
| Cluster | HCCA: Cluster_403 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01020250001 | No alias | No description available | 0.02 | Archaeplastida | |
| LOC_Os05g32430.1 | No alias | RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase | 0.03 | Archaeplastida | |
| LOC_Os11g31890.1 | No alias | subcluster H/CPL3-4 phosphatase | 0.02 | Archaeplastida | |
| Pp3c20_1520V3.1 | No alias | C-terminal domain phosphatase-like 3 | 0.02 | Archaeplastida | |
| Pp3c8_3780V3.1 | No alias | C-terminal domain phosphatase-like 4 | 0.02 | Archaeplastida | |
| Pp3c9_21430V3.1 | No alias | C-terminal domain phosphatase-like 4 | 0.02 | Archaeplastida | |
| Smo167775 | No alias | Protein modification.dephosphorylation.aspartate-based... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000808 | origin recognition complex | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003909 | DNA ligase activity | IEP | Neighborhood |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005664 | nuclear origin of replication recognition complex | IEP | Neighborhood |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| CC | GO:0016459 | myosin complex | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0040008 | regulation of growth | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood |
| CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0045927 | positive regulation of growth | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| No external refs found! |