MA_10435856g0010

Description : Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana (sp|o22993|ftsi1_arath : 486.0)

Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0009220 (LandPlants) Phylogenetic Tree(s): OG_05_0009220_tree ,
OG_06_0011943 (SeedPlants) Phylogenetic Tree(s): OG_06_0011943_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10435856g0010
Cluster	HCCA: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00260320	evm_27.TU.AmTr_v1...	Probable inactive ATP-dependent zinc metalloprotease...	0.03	Archaeplastida
AMTR_s00021p00235220	evm_27.TU.AmTr_v1...	Probable inactive ATP-dependent zinc metalloprotease...	0.03	Archaeplastida
AMTR_s00056p00047160	evm_27.TU.AmTr_v1...	Probable inactive ATP-dependent zinc metalloprotease...	0.1	Archaeplastida
AT3G02450	No alias	cell division protein ftsH, putative	0.07	Archaeplastida
AT3G16290	EMB2083	AAA-type ATPase family protein	0.06	Archaeplastida
AT4G23940	No alias	FtsH extracellular protease family	0.06	Archaeplastida
Cpa\|evm.model.tig00000704.23	No alias	ATP-dependent zinc metalloprotease FTSH 1, chloroplastic...	0.01	Archaeplastida
Cpa\|evm.model.tig00021127.121	No alias	ATP-dependent zinc metalloprotease FTSH 5, chloroplastic...	0.01	Archaeplastida
Cre03.g201100	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.02	Archaeplastida
Cre07.g352350	No alias	ATP-dependent zinc metalloprotease FTSH, chloroplastic...	0.01	Archaeplastida
Cre09.g393950	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.02	Archaeplastida
Cre12.g485800	No alias	Protein degradation.peptidase families.metallopeptidase...	0.02	Archaeplastida
Cre17.g720050	No alias	Protein degradation.peptidase families.metallopeptidase...	0.02	Archaeplastida
GSVIVT01017029001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.02	Archaeplastida
GSVIVT01019239001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.09	Archaeplastida
GSVIVT01036484001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.02	Archaeplastida
Gb_20809	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_28961	No alias	component FtsHi of protein translocation ATPase motor complex	0.02	Archaeplastida
Gb_32360	No alias	component FtsHi of protein translocation ATPase motor complex	0.07	Archaeplastida
MA_98203g0010	No alias	No annotation	0.05	Archaeplastida
Mp6g01370.1	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.09	Archaeplastida
Mp6g15080.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.1	Archaeplastida
Pp3c17_20370V3.1	No alias	AAA-type ATPase family protein	0.08	Archaeplastida
Pp3c23_14665V3.1	No alias	FtsH extracellular protease family	0.02	Archaeplastida
Pp3c4_20860V3.1	No alias	cell division protein ftsH, putative	0.03	Archaeplastida
Smo152929	No alias	Protein degradation.peptidase families.metallopeptidase...	0.06	Archaeplastida
Smo166773	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.07	Archaeplastida
Smo98591	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.05	Archaeplastida
Solyc03g046340.3.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.05	Archaeplastida
Solyc08g082530.4.1	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.08	Archaeplastida
Solyc12g044400.3.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.06	Archaeplastida
Zm00001e007868_P001	No alias	component FtsHi of protein translocation ATPase motor complex	0.05	Archaeplastida
Zm00001e030153_P001	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009119	ribonucleoside metabolic process	IEP	Neighborhood
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Neighborhood
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0042278	purine nucleoside metabolic process	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Neighborhood
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000642	Peptidase_M41	173	367
IPR003959	ATPase_AAA_core	24	78

External Links

No external refs found!

MA_10435856g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation