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  5. MA_10436012g0010

MA_10436012g0010


Description : deubiquitinase (UBP5|8-11)


Gene families : OG0002002 (Archaeplastida) Phylogenetic Tree(s): OG0002002_tree ,
OG_05_0001858 (LandPlants) Phylogenetic Tree(s): OG_05_0001858_tree ,
OG_06_0001444 (SeedPlants) Phylogenetic Tree(s): OG_06_0001444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436012g0010
Cluster HCCA: Cluster_359

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00166400 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
AMTR_s00020p00234520 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
AT4G10570 UBP9 ubiquitin-specific protease 9 0.03 Archaeplastida
AT4G10590 UBP10 ubiquitin-specific protease 10 0.03 Archaeplastida
Cre02.g117850 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
GSVIVT01001899001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
GSVIVT01019677001 No alias Protein degradation.peptidase families.cysteine-type... 0.05 Archaeplastida
GSVIVT01022582001 No alias Protein degradation.peptidase families.cysteine-type... 0.05 Archaeplastida
Gb_06866 No alias deubiquitinase (UBP5|8-11) 0.04 Archaeplastida
MA_104863g0010 No alias deubiquitinase (UBP5|8-11) 0.03 Archaeplastida
Mp3g14190.1 No alias deubiquitinase (UBP5|8-11) 0.02 Archaeplastida
Solyc08g083300.4.1 No alias deubiquitinase (UBP5|8-11) 0.06 Archaeplastida
Solyc09g019970.3.1 No alias deubiquitinase (UBP5|8-11) 0.03 Archaeplastida
Zm00001e002683_P002 No alias deubiquitinase (UBP5|8-11) 0.04 Archaeplastida
Zm00001e032844_P001 No alias deubiquitinase (UBP5|8-11) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016255 attachment of GPI anchor to protein IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 115 724
No external refs found!