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  5. MA_10436616g0010

MA_10436616g0010


Description : homogentisate phytyltransferase (VTE2/HPT)


Gene families : OG0003032 (Archaeplastida) Phylogenetic Tree(s): OG0003032_tree ,
OG_05_0002760 (LandPlants) Phylogenetic Tree(s): OG_05_0002760_tree ,
OG_06_0002524 (SeedPlants) Phylogenetic Tree(s): OG_06_0002524_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436616g0010
Cluster HCCA: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035912001 No alias Redox homeostasis.low-molecular-weight... 0.02 Archaeplastida
Solyc07g017770.3.1 No alias homogentisate phytyltransferase (VTE2/HPT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); }, function(xhr, status, error) { // Upon failure... set the tooltip content to error api.set('content.text', status + ': ' + error); }); return 'Loading...'; // Set some initial text } }, show: { effect: function() { $(this).fadeTo(500, 1); } }, hide: { effect: function() { $(this).fadeTo(500, 0); } }, position: { viewport: $(window) }, style: 'qtip-bootstrap' }); }); } $(function () { init_qtip(); $("#leafy_loader").html(get_loader_svg('loader_leafy')); init_planet_loader('loader_leafy'); $('[data-toggle="popover"]').popover({container: 'body'}); $('a[data-target=#helpModal], abbr[data-target=#helpModal]').click(function(ev) { ev.preventDefault(); var target = $(this).attr("href"); // load the url and show modal on success $("#helpModal .modal-content").load(target, function() { $("#helpModal").modal("show"); }); }); }); GO:0046872 metal ion binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000537 UbiA_prenyltransferase 171 341
No external refs found!