Coexpression cluster: Cluster_341 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009975 cyclase activity 2.61% (3/115) 8.76 0.0 2e-06
GO:0009976 tocopherol cyclase activity 2.61% (3/115) 8.76 0.0 2e-06
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 1.74% (2/115) 9.18 3e-06 0.000194
GO:0009085 lysine biosynthetic process 1.74% (2/115) 8.18 1.8e-05 0.000497
GO:0009089 lysine biosynthetic process via diaminopimelate 1.74% (2/115) 8.18 1.8e-05 0.000497
GO:0046451 diaminopimelate metabolic process 1.74% (2/115) 8.18 1.8e-05 0.000497
GO:0006553 lysine metabolic process 1.74% (2/115) 8.18 1.8e-05 0.000497
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 1.74% (2/115) 7.37 6.2e-05 0.001518
GO:0003690 double-stranded DNA binding 3.48% (4/115) 4.15 8.3e-05 0.001641
GO:0043648 dicarboxylic acid metabolic process 1.74% (2/115) 7.18 8.2e-05 0.001798
GO:0009066 aspartate family amino acid metabolic process 1.74% (2/115) 5.59 0.000795 0.012047
GO:1901605 alpha-amino acid metabolic process 2.61% (3/115) 4.08 0.000781 0.012822
GO:0009067 aspartate family amino acid biosynthetic process 1.74% (2/115) 5.65 0.00073 0.013066
GO:0072341 modified amino acid binding 0.87% (1/115) 9.18 0.001726 0.02
GO:0005542 folic acid binding 0.87% (1/115) 9.18 0.001726 0.02
GO:0051171 regulation of nitrogen compound metabolic process 5.22% (6/115) 2.05 0.003475 0.020743
GO:0031323 regulation of cellular metabolic process 5.22% (6/115) 2.05 0.003475 0.020743
GO:0080090 regulation of primary metabolic process 5.22% (6/115) 2.05 0.003475 0.020743
GO:0019222 regulation of metabolic process 5.22% (6/115) 2.01 0.003916 0.021431
GO:0010556 regulation of macromolecule biosynthetic process 5.22% (6/115) 2.08 0.00309 0.021739
GO:0009889 regulation of biosynthetic process 5.22% (6/115) 2.08 0.00309 0.021739
GO:0031326 regulation of cellular biosynthetic process 5.22% (6/115) 2.08 0.00309 0.021739
GO:2000112 regulation of cellular macromolecule biosynthetic process 5.22% (6/115) 2.08 0.00309 0.021739
GO:0060255 regulation of macromolecule metabolic process 5.22% (6/115) 2.02 0.003894 0.02192
GO:0010468 regulation of gene expression 5.22% (6/115) 2.06 0.003375 0.022165
GO:0016859 cis-trans isomerase activity 1.74% (2/115) 4.37 0.004279 0.022182
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 1.74% (2/115) 4.37 0.004279 0.022182
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 4.35% (5/115) 2.34 0.003266 0.022188
GO:0000413 protein peptidyl-prolyl isomerization 1.74% (2/115) 5.05 0.001693 0.022231
GO:0018208 peptidyl-proline modification 1.74% (2/115) 5.05 0.001693 0.022231
GO:0016798 hydrolase activity, acting on glycosyl bonds 4.35% (5/115) 2.28 0.003885 0.022508
GO:0016853 isomerase activity 2.61% (3/115) 3.56 0.002168 0.023728
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor 0.87% (1/115) 7.59 0.005169 0.024244
GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity 0.87% (1/115) 7.59 0.005169 0.024244
GO:0004784 superoxide dismutase activity 0.87% (1/115) 7.59 0.005169 0.024244
GO:0019219 regulation of nucleobase-containing compound metabolic process 5.22% (6/115) 2.09 0.003053 0.025061
GO:1903506 regulation of nucleic acid-templated transcription 5.22% (6/115) 2.1 0.002945 0.025225
GO:2001141 regulation of RNA biosynthetic process 5.22% (6/115) 2.1 0.002945 0.025225
GO:0051252 regulation of RNA metabolic process 5.22% (6/115) 2.1 0.002945 0.025225
GO:0006355 regulation of transcription, DNA-templated 5.22% (6/115) 2.1 0.002945 0.025225
GO:0018193 peptidyl-amino acid modification 1.74% (2/115) 4.25 0.005056 0.02554
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 1.74% (2/115) 4.75 0.002546 0.026397
GO:0003676 nucleic acid binding 7.83% (9/115) 1.46 0.00578 0.026482
GO:0004640 phosphoribosylanthranilate isomerase activity 0.87% (1/115) 7.18 0.006886 0.03083
GO:1901607 alpha-amino acid biosynthetic process 1.74% (2/115) 3.99 0.007164 0.031362
GO:0006520 cellular amino acid metabolic process 2.61% (3/115) 2.92 0.007456 0.031932
GO:0006801 superoxide metabolic process 0.87% (1/115) 6.86 0.0086 0.035296
GO:0072593 reactive oxygen species metabolic process 0.87% (1/115) 6.86 0.0086 0.035296
GO:0004045 aminoacyl-tRNA hydrolase activity 0.87% (1/115) 6.37 0.012019 0.048323
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.056 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_42 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_97 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.049 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_218 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_40 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.052 Archaeplastida Compare
Gingko biloba HCCA Cluster_209 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_337 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.051 Archaeplastida Compare
Zea mays HCCA Cluster_133 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_150 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_166 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_170 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.045 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_149 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_88 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_262 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_427 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_445 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_472 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_502 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_218 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_291 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_353 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_104 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_228 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.048 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_201 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_92 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_147 0.02 Archaeplastida Compare
Sequences (115) (download table)

InterPro Domains

GO Terms

Family Terms