Aliases : ATGER3, GLP3B, GER3, GLP3A, GLP3
Description : germin 3
Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0004417 (LandPlants) Phylogenetic Tree(s): OG_05_0004417_tree ,
OG_06_0002746 (SeedPlants) Phylogenetic Tree(s): OG_06_0002746_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G20630 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00089p00119070 | evm_27.TU.AmTr_v1... | Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
AMTR_s00110p00020470 | evm_27.TU.AmTr_v1... | Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
AMTR_s00114p00037920 | evm_27.TU.AmTr_v1... | Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
AT1G02335 | GL22 | germin-like protein subfamily 2 member 2 precursor | 0.04 | Archaeplastida | |
AT1G74820 | No alias | RmlC-like cupins superfamily protein | 0.04 | Archaeplastida | |
GSVIVT01000062001 | No alias | Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01000063001 | No alias | Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
GSVIVT01000065001 | No alias | Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01000067001 | No alias | Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01000068001 | No alias | Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01000069001 | No alias | Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01013822001 | No alias | Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
GSVIVT01020142001 | No alias | Germin-like protein 3-1 OS=Oryza sativa subsp. japonica | 0.05 | Archaeplastida | |
GSVIVT01021700001 | No alias | Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
GSVIVT01021705001 | No alias | Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
GSVIVT01030965001 | No alias | Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
GSVIVT01030967001 | No alias | Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
GSVIVT01031082001 | No alias | Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
Gb_11136 | No alias | Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... | 0.07 | Archaeplastida | |
Gb_25391 | No alias | Germin-like protein subfamily 1 member 1 OS=Arabidopsis... | 0.04 | Archaeplastida | |
Gb_30305 | No alias | Germin-like protein subfamily 2 member 1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Gb_34489 | No alias | Germin-like protein subfamily 2 member 1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
LOC_Os01g50900.1 | No alias | Germin-like protein 1-2 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
LOC_Os04g52720.1 | No alias | Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
LOC_Os05g19670.1 | No alias | Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
LOC_Os08g35750.1 | No alias | Germin-like protein 8-13 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
LOC_Os08g35760.1 | No alias | Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
MA_10429090g0010 | No alias | Germin-like protein subfamily 1 member 1 OS=Arabidopsis... | 0.05 | Archaeplastida | |
MA_42727g0010 | No alias | Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
MA_43266g0010 | No alias | Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
MA_7641850g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_8404570g0010 | No alias | Germin-like protein subfamily 3 member 3 OS=Arabidopsis... | 0.02 | Archaeplastida | |
MA_9661534g0010 | No alias | Germin-like protein OS=Mesembryanthemum crystallinum... | 0.02 | Archaeplastida | |
Mp5g05170.1 | No alias | Germin-like protein subfamily 3 member 2 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Smo89841 | No alias | Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
Solyc01g088300.3.1 | No alias | Germin-like protein subfamily 1 member 15 OS=Arabidopsis... | 0.05 | Archaeplastida | |
Solyc03g123410.1.1 | No alias | Auxin-binding protein ABP19a OS=Prunus persica... | 0.03 | Archaeplastida | |
Solyc07g041720.1.1 | No alias | Auxin-binding protein ABP19a OS=Prunus persica... | 0.03 | Archaeplastida | |
Zm00001e021636_P002 | No alias | Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
Zm00001e021637_P001 | No alias | Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
Zm00001e031079_P001 | No alias | Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... | 0.06 | Archaeplastida | |
Zm00001e032937_P001 | No alias | Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005576 | extracellular region | ISM | Interproscan |
CC | GO:0005618 | cell wall | IDA | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
BP | GO:0009409 | response to cold | IEP | Interproscan |
BP | GO:0009409 | response to cold | RCA | Interproscan |
CC | GO:0009505 | plant-type cell wall | IDA | Interproscan |
BP | GO:0009735 | response to cytokinin | IDA | Interproscan |
BP | GO:0010103 | stomatal complex morphogenesis | RCA | Interproscan |
BP | GO:0018119 | peptidyl-cysteine S-nitrosylation | IDA | Interproscan |
BP | GO:0019684 | photosynthesis, light reaction | RCA | Interproscan |
BP | GO:0030003 | cellular cation homeostasis | RCA | Interproscan |
CC | GO:0031012 | extracellular matrix | IDA | Interproscan |
BP | GO:0042742 | defense response to bacterium | RCA | Interproscan |
CC | GO:0048046 | apoplast | IDA | Interproscan |
BP | GO:0070838 | divalent metal ion transport | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000038 | very long-chain fatty acid metabolic process | IEP | Neighborhood |
MF | GO:0003727 | single-stranded RNA binding | IEP | Neighborhood |
MF | GO:0004854 | xanthine dehydrogenase activity | IEP | Neighborhood |
CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | Neighborhood |
BP | GO:0006949 | syncytium formation | IEP | Neighborhood |
BP | GO:0006954 | inflammatory response | IEP | Neighborhood |
BP | GO:0007623 | circadian rhythm | IEP | Neighborhood |
MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Neighborhood |
MF | GO:0008266 | poly(U) RNA binding | IEP | Neighborhood |
MF | GO:0008320 | protein transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0009451 | RNA modification | IEP | Neighborhood |
CC | GO:0009526 | plastid envelope | IEP | Neighborhood |
CC | GO:0009534 | chloroplast thylakoid | IEP | Neighborhood |
BP | GO:0009556 | microsporogenesis | IEP | Neighborhood |
CC | GO:0009579 | thylakoid | IEP | Neighborhood |
BP | GO:0009631 | cold acclimation | IEP | Neighborhood |
BP | GO:0009733 | response to auxin | IEP | Neighborhood |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009893 | positive regulation of metabolic process | IEP | Neighborhood |
BP | GO:0009894 | regulation of catabolic process | IEP | Neighborhood |
BP | GO:0009895 | negative regulation of catabolic process | IEP | Neighborhood |
CC | GO:0009941 | chloroplast envelope | IEP | Neighborhood |
BP | GO:0009965 | leaf morphogenesis | IEP | Neighborhood |
BP | GO:0010375 | stomatal complex patterning | IEP | Neighborhood |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010628 | positive regulation of gene expression | IEP | Neighborhood |
MF | GO:0015450 | P-P-bond-hydrolysis-driven protein transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
BP | GO:0016556 | mRNA modification | IEP | Neighborhood |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0016630 | protochlorophyllide reductase activity | IEP | Neighborhood |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Neighborhood |
MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0030154 | cell differentiation | IEP | Neighborhood |
BP | GO:0030497 | fatty acid elongation | IEP | Neighborhood |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0031329 | regulation of cellular catabolic process | IEP | Neighborhood |
BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | Neighborhood |
CC | GO:0031967 | organelle envelope | IEP | Neighborhood |
CC | GO:0031975 | envelope | IEP | Neighborhood |
CC | GO:0031976 | plastid thylakoid | IEP | Neighborhood |
CC | GO:0031984 | organelle subcompartment | IEP | Neighborhood |
BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
BP | GO:0034293 | sexual sporulation | IEP | Neighborhood |
BP | GO:0040034 | regulation of development, heterochronic | IEP | Neighborhood |
MF | GO:0042887 | amide transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0043487 | regulation of RNA stability | IEP | Neighborhood |
BP | GO:0043489 | RNA stabilization | IEP | Neighborhood |
BP | GO:0043934 | sporulation | IEP | Neighborhood |
CC | GO:0044434 | chloroplast part | IEP | Neighborhood |
CC | GO:0044435 | plastid part | IEP | Neighborhood |
BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0045962 | positive regulation of development, heterochronic | IEP | Neighborhood |
BP | GO:0048236 | plant-type sporogenesis | IEP | Neighborhood |
BP | GO:0048511 | rhythmic process | IEP | Neighborhood |
BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
BP | GO:0048582 | positive regulation of post-embryonic development | IEP | Neighborhood |
BP | GO:0048869 | cellular developmental process | IEP | Neighborhood |
BP | GO:0051094 | positive regulation of developmental process | IEP | Neighborhood |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051240 | positive regulation of multicellular organismal process | IEP | Neighborhood |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0051321 | meiotic cell cycle | IEP | Neighborhood |
BP | GO:0052386 | cell wall thickening | IEP | Neighborhood |
BP | GO:0052543 | callose deposition in cell wall | IEP | Neighborhood |
BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | Neighborhood |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Neighborhood |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Neighborhood |
MF | GO:1904680 | peptide transmembrane transporter activity | IEP | Neighborhood |
BP | GO:1905392 | plant organ morphogenesis | IEP | Neighborhood |
BP | GO:2000038 | regulation of stomatal complex development | IEP | Neighborhood |
BP | GO:2000123 | positive regulation of stomatal complex development | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006045 | Cupin_1 | 57 | 200 |
No external refs found! |