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  5. MA_10437082g0020

MA_10437082g0020


Description : component SYF1/MAC9 of non-snRNP MOS4-associated complex


Gene families : OG0005297 (Archaeplastida) Phylogenetic Tree(s): OG0005297_tree ,
OG_05_0005927 (LandPlants) Phylogenetic Tree(s): OG_05_0005927_tree ,
OG_06_0004761 (SeedPlants) Phylogenetic Tree(s): OG_06_0004761_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10437082g0020
Cluster HCCA: Cluster_478

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00216060 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
AT5G28740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00001206.15 No alias RNA processing.RNA splicing.spliceosome-associated... 0.01 Archaeplastida
Cre12.g513500 No alias RNA processing.RNA splicing.spliceosome-associated... 0.04 Archaeplastida
GSVIVT01006714001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 Archaeplastida
Gb_19093 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.06 Archaeplastida
Mp4g15330.1 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Pp3c1_10210V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Solyc01g086990.3.1 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.05 Archaeplastida
Zm00001e010869_P001 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR008847 Suf 542 698
No external refs found!