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  5. MA_10437214g0020

MA_10437214g0020


Description : adherin (SCC2)


Gene families : OG0003452 (Archaeplastida) Phylogenetic Tree(s): OG0003452_tree ,
OG_05_0003604 (LandPlants) Phylogenetic Tree(s): OG_05_0003604_tree ,
OG_06_0004098 (SeedPlants) Phylogenetic Tree(s): OG_06_0004098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10437214g0020
Cluster HCCA: Cluster_380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00053630 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.06 Archaeplastida
AT5G15540 SCC2, ATSCC2, EMB2773 PHD finger family protein 0.16 Archaeplastida
GSVIVT01011514001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.13 Archaeplastida
Gb_05661 No alias adherin (SCC2) 0.09 Archaeplastida
Gb_41687 No alias adherin (SCC2) 0.12 Archaeplastida
LOC_Os07g01940.1 No alias adherin (SCC2) 0.04 Archaeplastida
MA_10436664g0010 No alias adherin (SCC2) 0.03 Archaeplastida
Mp4g10640.1 No alias adherin (SCC2) 0.07 Archaeplastida
Smo440913 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.13 Archaeplastida
Solyc03g059420.4.1 No alias No annotation 0.11 Archaeplastida
Zm00001e011569_P001 No alias adherin (SCC2) 0.07 Archaeplastida
Zm00001e032695_P001 No alias adherin (SCC2) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR026003 Cohesin_HEAT 493 534
No external refs found!