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Description : Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana (sp|q9fmf6|pp444_arath : 384.0)
Gene families : OG0001630 (Archaeplastida) Phylogenetic Tree(s): OG0001630_tree ,
OG_05_0001046 (LandPlants) Phylogenetic Tree(s): OG_05_0001046_tree ,
OG_06_0000527 (SeedPlants) Phylogenetic Tree(s): OG_06_0000527_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_105495g0010 | |
| Cluster | HCCA: Cluster_341 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| MA_914400g0010 | No alias | Pentatricopeptide repeat-containing protein At5g55840... | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
| BP | GO:0006353 | DNA-templated transcription, termination | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 117 | 148 |
| IPR002885 | Pentatricopeptide_repeat | 155 | 204 |
| IPR002885 | Pentatricopeptide_repeat | 435 | 484 |
| IPR002885 | Pentatricopeptide_repeat | 296 | 344 |
| IPR002885 | Pentatricopeptide_repeat | 365 | 414 |
| IPR002885 | Pentatricopeptide_repeat | 575 | 624 |
| IPR002885 | Pentatricopeptide_repeat | 505 | 554 |
| IPR002885 | Pentatricopeptide_repeat | 225 | 274 |
| No external refs found! |