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MA_108374g0010


Description : KH domain-containing protein HEN4 OS=Arabidopsis thaliana (sp|f4kdn0|hen4_arath : 114.0)


Gene families : OG0000393 (Archaeplastida) Phylogenetic Tree(s): OG0000393_tree ,
OG_05_0000380 (LandPlants) Phylogenetic Tree(s): OG_05_0000380_tree ,
OG_06_0005388 (SeedPlants) Phylogenetic Tree(s): OG_06_0005388_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_108374g0010
Cluster HCCA: Cluster_427

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031037001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_31686 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
LOC_Os09g32300.1 No alias KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 Archaeplastida
MA_10430861g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g067210.3.1 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g034200.3.1 No alias RNA-binding KH domain-containing protein RCF3... 0.03 Archaeplastida
Zm00001e001825_P001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e004486_P005 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e039986_P003 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 220 285
IPR004088 KH_dom_type_1 137 186
No external refs found!