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  5. AT5G22720

AT5G22720


Description : F-box/RNI-like superfamily protein


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22720
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G13780 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT1G16940 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT1G32020 No alias F-box family protein 0.07 Archaeplastida
AT1G60400 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT1G66640 No alias RNI-like superfamily protein 0.09 Archaeplastida
AT1G78750 No alias F-box/RNI-like superfamily protein 0.11 Archaeplastida
AT1G78760 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.05 Archaeplastida
AT5G22670 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G25850 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 Archaeplastida
AT5G44940 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT5G44950 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 Archaeplastida
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.08 Archaeplastida
AT5G44980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.1 Archaeplastida
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000987 proximal promoter sequence-specific DNA binding IEP Neighborhood
CC GO:0001673 male germ cell nucleus IEP Neighborhood
MF GO:0004108 citrate (Si)-synthase activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010214 seed coat development IEP Neighborhood
BP GO:0010222 stem vascular tissue pattern formation IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0030332 cyclin binding IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032204 regulation of telomere maintenance IEP Neighborhood
BP GO:0032504 multicellular organism reproduction IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0036440 citrate synthase activity IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
CC GO:0043073 germ cell nucleus IEP Neighborhood
BP GO:0043247 telomere maintenance in response to DNA damage IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0048830 adventitious root development IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0080159 zygote elongation IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 24 60
IPR013101 Leu-rich_rpt_2 173 198
IPR006566 FBD 554 597
IPR006566 FBD 333 357
No external refs found!