MA_112261g0010

Description : Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana (sp|q9fmm4|rhg1a_arath : 132.0)

Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0000151 (LandPlants) Phylogenetic Tree(s): OG_05_0000151_tree ,
OG_06_0073435 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_112261g0010
Cluster	HCCA: Cluster_339

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01016299001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
Zm00001e006754_P001	No alias	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Neighborhood
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Neighborhood
CC	GO:0017119	Golgi transport complex	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	828	870

External Links

No external refs found!