Coexpression cluster: Cluster_339 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005198 structural molecule activity 5.83% (6/103) 3.7 8e-06 0.00015
GO:0006518 peptide metabolic process 5.83% (6/103) 3.73 7e-06 0.000153
GO:0043603 cellular amide metabolic process 5.83% (6/103) 3.65 9e-06 0.000153
GO:0043604 amide biosynthetic process 5.83% (6/103) 3.75 6e-06 0.000158
GO:1990904 ribonucleoprotein complex 5.83% (6/103) 3.66 9e-06 0.000162
GO:0043232 intracellular non-membrane-bounded organelle 5.83% (6/103) 3.76 6e-06 0.000181
GO:0043228 non-membrane-bounded organelle 5.83% (6/103) 3.76 6e-06 0.000181
GO:0043043 peptide biosynthetic process 5.83% (6/103) 3.83 5e-06 0.000204
GO:0003735 structural constituent of ribosome 5.83% (6/103) 3.83 5e-06 0.000204
GO:0044444 cytoplasmic part 6.8% (7/103) 3.04 2.5e-05 0.00032
GO:0004057 arginyltransferase activity 1.94% (2/103) 8.02 2.4e-05 0.000323
GO:0016598 protein arginylation 1.94% (2/103) 8.02 2.4e-05 0.000323
GO:1901566 organonitrogen compound biosynthetic process 6.8% (7/103) 3.0 3e-05 0.000362
GO:0006412 translation 5.83% (6/103) 3.85 4e-06 0.000375
GO:0016755 transferase activity, transferring amino-acyl groups 1.94% (2/103) 7.75 3.5e-05 0.000393
GO:0005840 ribosome 5.83% (6/103) 3.87 4e-06 0.000689
GO:0034645 cellular macromolecule biosynthetic process 5.83% (6/103) 2.97 0.000126 0.001314
GO:0043229 intracellular organelle 5.83% (6/103) 2.85 0.000197 0.001752
GO:0043226 organelle 5.83% (6/103) 2.85 0.000197 0.001752
GO:0009059 macromolecule biosynthetic process 5.83% (6/103) 2.87 0.000185 0.001833
GO:1901576 organic substance biosynthetic process 7.77% (8/103) 2.26 0.000291 0.00247
GO:0034641 cellular nitrogen compound metabolic process 7.77% (8/103) 2.24 0.000317 0.002567
GO:0044271 cellular nitrogen compound biosynthetic process 5.83% (6/103) 2.71 0.000334 0.002584
GO:0009058 biosynthetic process 7.77% (8/103) 2.11 0.000554 0.004108
GO:0044249 cellular biosynthetic process 6.8% (7/103) 2.16 0.00103 0.007333
GO:0006432 phenylalanyl-tRNA aminoacylation 0.97% (1/103) 9.34 0.001546 0.010583
GO:0031227 intrinsic component of endoplasmic reticulum membrane 0.97% (1/103) 8.34 0.003089 0.016663
GO:0047661 amino-acid racemase activity 0.97% (1/103) 8.34 0.003089 0.016663
GO:0030176 integral component of endoplasmic reticulum membrane 0.97% (1/103) 8.34 0.003089 0.016663
GO:0016126 sterol biosynthetic process 0.97% (1/103) 8.34 0.003089 0.016663
GO:0008837 diaminopimelate epimerase activity 0.97% (1/103) 8.34 0.003089 0.016663
GO:0044424 intracellular part 6.8% (7/103) 1.9 0.002829 0.018653
GO:0032991 protein-containing complex 5.83% (6/103) 2.09 0.00304 0.019324
GO:0016125 sterol metabolic process 0.97% (1/103) 7.75 0.00463 0.023548
GO:0044464 cell part 6.8% (7/103) 1.78 0.004502 0.02357
GO:0006553 lysine metabolic process 0.97% (1/103) 7.34 0.006169 0.026145
GO:0009089 lysine biosynthetic process via diaminopimelate 0.97% (1/103) 7.34 0.006169 0.026145
GO:0009085 lysine biosynthetic process 0.97% (1/103) 7.34 0.006169 0.026145
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives 0.97% (1/103) 7.34 0.006169 0.026145
GO:0036361 racemase activity, acting on amino acids and derivatives 0.97% (1/103) 7.34 0.006169 0.026145
GO:0000030 mannosyltransferase activity 0.97% (1/103) 7.34 0.006169 0.026145
GO:0046451 diaminopimelate metabolic process 0.97% (1/103) 7.34 0.006169 0.026145
GO:0004181 metallocarboxypeptidase activity 0.97% (1/103) 7.02 0.007705 0.030479
GO:0008235 metalloexopeptidase activity 0.97% (1/103) 7.02 0.007705 0.030479
GO:1901564 organonitrogen compound metabolic process 10.68% (11/103) 1.23 0.0074 0.030634
GO:0006807 nitrogen compound metabolic process 11.65% (12/103) 1.13 0.008531 0.033012
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 0.97% (1/103) 6.53 0.010771 0.040793
GO:0043648 dicarboxylic acid metabolic process 0.97% (1/103) 6.34 0.0123 0.042931
GO:0043492 ATPase activity, coupled to movement of substances 1.94% (2/103) 3.6 0.012076 0.042989
GO:0042626 ATPase activity, coupled to transmembrane movement of substances 1.94% (2/103) 3.6 0.012076 0.042989
GO:0043170 macromolecule metabolic process 10.68% (11/103) 1.13 0.011732 0.043505
GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity 1.94% (2/103) 3.42 0.015245 0.045226
GO:0015399 primary active transmembrane transporter activity 1.94% (2/103) 3.42 0.015245 0.045226
GO:0016854 racemase and epimerase activity 0.97% (1/103) 6.17 0.013827 0.046439
GO:1901617 organic hydroxy compound biosynthetic process 0.97% (1/103) 6.17 0.013827 0.046439
GO:0019538 protein metabolic process 8.74% (9/103) 1.22 0.015239 0.046768
GO:0042623 ATPase activity, coupled 1.94% (2/103) 3.47 0.014306 0.047158
GO:0044267 cellular protein metabolic process 7.77% (8/103) 1.32 0.015119 0.047214
GO:0034660 ncRNA metabolic process 1.94% (2/103) 3.43 0.015008 0.047703
GO:0003723 RNA binding 2.91% (3/103) 2.56 0.014789 0.047861
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_33 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.033 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_149 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_256 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_320 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_155 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_301 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_108 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_229 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_314 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_411 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_461 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_535 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_155 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_342 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_219 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_277 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_1 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_83 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.027 Archaeplastida Compare
Sequences (103) (download table)

InterPro Domains

GO Terms

Family Terms